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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2044670 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00417080_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
HY057336.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication C16orf91 NTHL1 AXIN1 LOC105371038 FAM173A PIGQ MIR4516 SNORA64 JMJD8 STUB1 MIR5587 RAB11FIP3 ECI1 CCNF LOC106660606 WASIR2 MIR662 PRR35 POLR3K METTL26 ABCA17P TSR3 ABCA3 SNHG9 TBC1D24 LMF1 GFER TPSG1 MIR3177 TSC2 TPSB2 UNKL NUBP2 UBE2I SNHG19 FAM234A SLC9A3R2 LOC101929280 FBXL16 HS3ST6 RAB26 HN1L NTN3 HBM ATP6V0C LINC00254 CRAMP1 NARFL IFT140 HBA2 DECR2 CACNA1H PDPK1 DNASE1L2 TPSD1 PRSS29P MCRIP2 NDUFB10 FAHD1 NME4 LOC100287175 WDR24 LOC107987233 MIR6768 C1QTNF8 WFIKKN1 RHBDL1 NPRL3 GNPTG NPW NME3 TBL3 MIR6859-4 TPSAB1 MIR3178 MEIOB LOC729652 NOXO1 LMF1-AS1 RPS2 SSTR5-AS1 RHBDF1 METRN SNORA10 HBQ1 MIR3176 HBZ HBA1 MIR3677 LUC7L PKD1 TRAF7 LOC105371184 ARHGDIG WDR90 PGP ERVK13-1 MPG LOC100134368 MIR6511B1 MIR3180-5 MSRB1 RNF151 CASKIN1 SOX8 LOC105371049 LOC105371047 LOC105371045 CEMP1 HAGHL NHLRC4 RPL3L MRPL28 ZNF598 KCTD5 LINC00235 SNORD60 CCDC78 LOC107984876 TMEM8A E4F1 DDX11L10 CHTF18 IGFALS MIR1225 MRPS34 TELO2 MIR940 EME2 TMEM204 SPSB3 CCDC154 RGS11 RAB40C MAPK8IP3 MSLN AMDHD2 MLST8 SNRNP25 LOC652276 SSTR5 PTX4 SNORA78 LOC105371046 HAGH BRICD5 C16orf59 PRR25 MIR6767 RNPS1 CAPN15 MIR4717 BAIAP3 PDIA2 SYNGR3 RPL23AP5 RPUSD1 RHOT2 GNG13 CLCN7 FLJ42627 PRSS27
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss NOXO1 NTHL1 MIR940 MIR4516 MIR3677 PKD1 MLST8 TRAF7 ECI1 LOC106660606 DNASE1L2 PGP MIR6511B1 MIR3180-5 BRICD5 CASKIN1 ABCA3 LOC105371049 GFER RNPS1 ZNF598 MIR4717 TSC2 NPW SNORD60 E4F1 SNHG19 SYNGR3 TBL3 SLC9A3R2 MIR1225 RAB26
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NOXO1 NTHL1 LOC105371049 RPS2 SNHG9 SNORA10 MIR4516 SNORA64 GFER RPL3L ZNF598 PKD1 TSC2 NPW SNORA78 SYNGR3 TBL3 NDUFB10 SLC9A3R2 MIR6511B1 MIR1225 MSRB1 RNF151 HS3ST6
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NOXO1 NTHL1 LOC105371049 RPS2 SNHG9 SNORA10 SNORA64 GFER ZNF598 PKD1 TSC2 NPW SNORA78 SYNGR3 TBL3 NDUFB10 SLC9A3R2 MIR6511B1 MIR1225 RNF151

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