Hs05488587_cn

• Gene Symbol: JMJD6
• Assay Reference Genome Location: Chr.17:76717444 on build GRCh38
• Cytoband: 17q25.1

Target Gene Details

• Entrez Gene ID: 23210
• Gene Name: arginine demethylase and lysine hydroxylase
• Gene Aliases: PSR, PTDSR, PTDSR1
• Location: Chr.17:76712830-76726799 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
JMJD6	NM_001081461.1			NP_001074930.1
	AB011157.1
	AB073711.1			BAC16755.1
	AK294816.1
	AK314541.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833550	Chr.17:76712038 - 76886290 on Build GRCh38	Loss	SRSF2 LOC101928514 MIR636 MGAT5B METTL23 LINC00868 JMJD6 MFSD11
esv28006	Chr.17:76706699 - 76720681 on Build GRCh38	Gain	MXRA7 JMJD6

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Process(es)

kidney development
sprouting angiogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA processing
cell surface receptor signaling pathway
heart development
RNA splicing
peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
lung development
T cell differentiation in thymus
macrophage activation
recognition of apoptotic cell
regulation of mRNA splicing, via spliceosome
erythrocyte development
oxidation-reduction process
retina development in camera-type eye
histone H3-R2 demethylation
histone H4-R3 demethylation

Function(s)

RNA binding
single-stranded RNA binding
receptor activity
iron ion binding
protein binding
histone demethylase activity
histone demethylase activity (H3-R2 specific)
histone demethylase activity (H4-R3 specific)
identical protein binding
protein homodimerization activity
peptidyl-lysine 5-dioxygenase activity