Hs05115385_cn

• Gene Symbol: RGR
• Assay Reference Genome Location: Chr.10:84255404 on build GRCh38
• Cytoband: 10q23.1

Target Gene Details

• Entrez Gene ID: 5995
• Gene Name: retinal G protein coupled receptor
• Gene Aliases: RP44
• Location: Chr.10:84245053-84259188 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RGR	NM_001012720.1			NP_001012738.1
	NM_001012722.1			NP_001012740.1
	NM_002921.3			NP_002912.2
	BC011349.1			AAH11349.1
	BG912392.1
	BX641033.1
	KU178307.1
	KU178308.1
	U14910.1			AAA56748.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527522	Chr.10:84252173 - 84272997 on Build GRCh38	Loss	RGR
nsv1046749	Chr.10:83270389 - 84629720 on Build GRCh38	Gain	C10orf99 GHITM RGR LRIT1 LOC105378397 CDHR1 HOST2 LINC00858 LRIT2 CCSER2
nsv551745	Chr.10:83260366 - 84632635 on Build GRCh38	Gain	C10orf99 GHITM RGR LRIT1 LOC105378397 CDHR1 HOST2 LINC00858 LRIT2 CCSER2

More Information

Additional Information:

For this assay, SNP(s) [rs74145780] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

G-protein coupled receptor signaling pathway
visual perception
phototransduction
protein-chromophore linkage

Function(s)

G-protein coupled receptor activity
protein binding
photoreceptor activity