Genomic Map
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Target Gene Details
Entrez Gene ID: | 2806 |
Gene Name: | glutamic-oxaloacetic transaminase 2 |
Gene Aliases: |
KAT4, KATIV, KYAT4, mitAAT |
Location: |
Chr.16:58707131-58734357 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| GOT2 | NM_001286220.1 | NP_001273149.1 | ||
| NM_002080.3 | NP_002071.2 | |||
| AK098313.1 | ||||
| AK223271.1 | BAD96991.1 | |||
| AK290847.1 | ||||
| AK295993.1 | ||||
| AK302249.1 | ||||
| AK307598.1 | ||||
| AL516773.3 | ||||
| BC000525.2 | AAH00525.1 | |||
| BI667777.1 | ||||
| M22632.1 | AAA35568.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv510686 | Chr.16:58612215 - 58731990 on Build GRCh38 | Deletion |
 CNOT1
SLC38A7
GOT2
|
| nsv1065296 | Chr.16:58704294 - 58803955 on Build GRCh38 | Loss |
GOT2
|
| esv2758650 | Chr.16:58545101 - 58842133 on Build GRCh38 | Loss |
SNORA50A
CNOT1
SNORA46
SLC38A7
GOT2
|
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Additional Information:
For this assay, SNP(s) [rs114163254] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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