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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2046320 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02202674_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 2 208 NP_001305122.1
NM_001318194.1 2 208 NP_001305123.1
NM_002528.6 2 208 NP_002519.1
XM_017023253.1 2 211 XP_016878742.1
AB001575.1 2 172 BAA19413.1
BC000391.2 2 165 AAH00391.2
BC003014.1 2 165 AAH03014.1
BE900738.1 2 90
BG468617.1 2 134
HY057336.1 2 185
HY094895.1 2 211
U79718.1 2 205 AAB41534.1
U81285.1 2 170 AAC51136.1
Y09687.1 2 162 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SSTR5 LOC100287175 MRPL28 CLCN7 HBQ1 RNF151 TBC1D24 FAM173A SOX8 SSTR5-AS1 KCTD5 C16orf59 SNORA78 GFER TMEM8A ABCA17P RPS2 BRICD5 STUB1 HBA1 LMF1-AS1 IGFALS ERVK13-1 RHBDL1 NOXO1 UBE2I TPSG1 HAGHL PTX4 HS3ST6 HAGH PRR25 PDIA2 TPSAB1 E4F1 RPL3L LOC107987233 BAIAP3 TSC2 LOC105371038 MIR6767 RGS11 LOC101929280 LOC107984876 FAM234A MPG WFIKKN1 WASIR2 PRSS29P LUC7L PIGQ MSLN RAB26 NPW PDPK1 MIR6768 MIR4516 TPSD1 LINC00235 MIR3677 LOC100134368 PRR35 UNKL LOC106660606 AMDHD2 MIR3180-5 MIR940 RAB40C HBM HN1L GNPTG LOC105371049 LOC105371047 FAHD1 CHTF18 SNORA64 RHBDF1 ECI1 FLJ42627 RAB11FIP3 TBL3 SNHG19 HBZ NTHL1 RPUSD1 C16orf91 MIR5587 SNORA10 ATP6V0C TPSB2 MSRB1 LOC652276 MIR3177 POLR3K WDR90 PRSS27 ABCA3 RNPS1 LOC105371045 MIR662 MAPK8IP3 LOC105371046 HBA2 PKD1 CCNF MIR6511B1 WDR24 MEIOB NTN3 CAPN15 SNRNP25 DNASE1L2 LOC105371184 RHOT2 SNHG9 DDX11L10 AXIN1 NME3 NME4 TMEM204 MIR4717 MIR1225 TSR3 CASKIN1 ARHGDIG SPSB3 CCDC154 NARFL PGP LOC729652 NDUFB10 CRAMP1 CACNA1H RPL23AP5 CEMP1 EME2 TELO2 METRN LMF1 METTL26 C1QTNF8 LINC00254 SNORD60 JMJD8 MIR6859-4 NHLRC4 MLST8 TRAF7 CCDC78 SYNGR3 ZNF598 MRPS34 GNG13 NUBP2 MIR3178 MCRIP2 MIR3176 SLC9A3R2 FBXL16 NPRL3 IFT140 DECR2
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss MIR4717 LOC106660606 MIR1225 CASKIN1 MIR3180-5 MIR940 NOXO1 LOC105371049 PGP ECI1 TBL3 SNHG19 E4F1 NTHL1 TSC2 SNORD60 ABCA3 RNPS1 GFER PKD1 MIR6511B1 MLST8 BRICD5 TRAF7 SYNGR3 ZNF598 RAB26 DNASE1L2 NPW SLC9A3R2 MIR4516 MIR3677
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MSRB1 MIR1225 NOXO1 SNORA78 GFER LOC105371049 PKD1 MIR6511B1 SNORA64 NDUFB10 HS3ST6 RPS2 RNF151 SYNGR3 ZNF598 TBL3 NPW SNHG9 RPL3L SLC9A3R2 NTHL1 MIR4516 SNORA10 TSC2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion MIR1225 NOXO1 SNORA78 GFER LOC105371049 PKD1 MIR6511B1 SNORA64 NDUFB10 RPS2 RNF151 SYNGR3 ZNF598 TBL3 NPW SNHG9 SLC9A3R2 NTHL1 SNORA10 TSC2

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