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See other PLOD3 CNV Assays ›
Gene Symbol
PLOD3
Assay Reference Genome
Location

Chr.7:101208904 on build GRCh38
Cytoband
7q22.1
Assay ID Hs02098091_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8985

Gene Name:

 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Gene Aliases:

 LH3

Location:

 Chr.7:101205977-101217730 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLOD3 NM_001084.4 NP_001075.1
AF046889.1 AAC39753.1
AF068229.1 AAC34808.1
AK075338.1
AK312743.1
AL049952.1 CAB43221.1
AY220458.1 AAO61775.1
BC011674.2 AAH11674.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422376 Chr.7:101100204 - 101373190 on Build GRCh38 Duplication NAT16 COL26A1 FIS1 VGF MOGAT3 ZNHIT1 LOC101927746 LOC101927721 MIR4653 CLDN15 SERPINE1 PLOD3 AP1S1 IFT22
esv2422326 Chr.7:101190168 - 101356850 on Build GRCh38 Duplication FIS1 MOGAT3 ZNHIT1 LOC101927746 LOC101927721 CLDN15 PLOD3 IFT22
nsv1030604 Chr.7:101074451 - 101580185 on Build GRCh38 Gain NAT16 COL26A1 FIS1 TRIM56 VGF MOGAT3 ZNHIT1 LOC101927746 LOC101927721 MIR4653 CLDN15 LINC01007 SERPINE1 PLOD3 AP1S1 IFT22
dgv11534n54 Chr.7:101160859 - 101238359 on Build GRCh38 Loss NAT16 VGF MOGAT3 ZNHIT1 CLDN15 PLOD3 AP1S1
esv2752134 Chr.7:101156850 - 101498586 on Build GRCh38 Gain NAT16 COL26A1 FIS1 VGF MOGAT3 ZNHIT1 LOC101927746 LOC101927721 MIR4653 CLDN15 PLOD3 AP1S1 IFT22
nsv607973 Chr.7:101139179 - 101230554 on Build GRCh38 Loss NAT16 VGF MOGAT3 ZNHIT1 MIR4653 SERPINE1 PLOD3 AP1S1
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion PILRA SAP25 STAG3L5P-PVRIG2P-PILRB MUC3A MIR4658 LRCH4 AZGP1 GIGYF1 ZAN PMS2P1 PILRB MCM7 LAMTOR4 MUC12 NAT16 PCOLCE AGFG2 GPC2 MIR4653 PVRIG2P STAG3L5P TSC22D4 TAF6 MIR6840 MIR93 MIR106B C7orf61 C7orf43 TRIP6 LOC102724094 AP1S1 ZCWPW1 MIR6875 CNPY4 SRRT AP4M1 ZASP UFSP1 MEPCE TFR2 PVRIG ZKSCAN1 GATS EPHB4 PCOLCE-AS1 GNB2 GAL3ST4 AZGP1P1 NYAP1 LOC105375429 POP7 FBXO24 ZSCAN21 FIS1 TRIM56 VGF MOGAT3 PPP1R35 ZNHIT1 COPS6 CLDN15 SLC12A9 ACHE ZNF3 SPDYE3 MOSPD3 SERPINE1 MUC17 MIR25 PLOD3 ACTL6B MBLAC1 STAG3 EPO
nsv831075 Chr.7:101049016 - 101273737 on Build GRCh38 Loss NAT16 FIS1 TRIM56 VGF MOGAT3 ZNHIT1 MIR4653 SERPINE1 MUC17 CLDN15 PLOD3 AP1S1
nsv607974 Chr.7:101149529 - 101328323 on Build GRCh38 Loss NAT16 FIS1 VGF MOGAT3 ZNHIT1 LOC101927746 LOC101927721 MIR4653 CLDN15 PLOD3 AP1S1 IFT22
esv3614319 Chr.7:101206795 - 101265542 on Build GRCh38 Gain FIS1 ZNHIT1 CLDN15 PLOD3
nsv1018841 Chr.7:101117129 - 101225018 on Build GRCh38 Gain NAT16 VGF MOGAT3 ZNHIT1 MIR4653 SERPINE1 PLOD3 AP1S1
nsv831076 Chr.7:101185566 - 101368393 on Build GRCh38 Loss COL26A1 FIS1 MOGAT3 ZNHIT1 LOC101927746 LOC101927721 CLDN15 PLOD3 IFT22

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