Assay Details
Target Gene Details
Entrez Gene ID: | 140739 |
Gene Name: | ubiquitin conjugating enzyme E2 F (putative) |
Gene Aliases: |
NCE2 |
Location: |
Chr.2:237966945-238042782 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBE2F | NM_001278305.1 | NP_001265234.1 | ||
NM_001278306.1 | NP_001265235.1 | |||
NM_001278307.1 | NP_001265236.1 | |||
NM_001278308.1 | NP_001265237.1 | |||
NM_080678.2 | NP_542409.1 | |||
NR_103498.1 | ||||
NR_103499.1 | ||||
NR_103500.1 | ||||
AF310723.1 | AAL26792.1 | |||
AK290063.1 | ||||
AK293334.1 | ||||
AK294107.1 | ||||
AK297502.1 | ||||
AK303094.1 | ||||
BC010549.1 | AAH10549.1 | |||
BM920749.1 | ||||
BQ959565.1 | ||||
BX421077.2 | ||||
DA140546.1 | ||||
DB118122.1 |
Target Gene Details
Entrez Gene ID: | 100533179 |
Gene Name: | UBE2F-SCLY readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.2:237966945-238099413 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBE2F-SCLY | NR_037904.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1011723 | Chr.2:237988669 - 238037969 on Build GRCh38 | Gain | UBE2F UBE2F-SCLY |
nsv1000252 | Chr.2:235899999 - 238766417 on Build GRCh38 | Loss | SCLY AGAP1 ILKAP LINC01107 LOC105373944 GBX2 LRRFIP1 PER2 MIR6811 RAB17 ESPNL LOC101927958 HES6 ASB18 MLPH LOC105373958 TRAF3IP1 LOC151174 LOC105373991 KLHL30 PRLH LOC643387 COPS8 LOC93463 ACKR3 UBE2F ERFE RBM44 IQCA1 RAMP1 UBE2F-SCLY ASB1 COL6A3 |
More Information
Additional Information:
For this assay, SNP(s) [rs75041454] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |