Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | MCPH1-AS1 MIR4659A MIR8055 ANGPT2 DEFB1 AGPAT5 DEFA8P GS1-24F4.2 MIR4659B XKR5 DEFA6 MCPH1 DEFA4 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MCPH1-AS1 MIR4659A MIR8055 ANGPT2 DEFB1 AGPAT5 GS1-24F4.2 XKR5 MIR4659B MCPH1 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MCPH1-AS1 MIR4659A MIR8055 AGPAT5 XKR5 MIR4659B MCPH1 |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | MCPH1-AS1 AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MCPH1-AS1 MIR4659A MIR8055 ANGPT2 DEFB1 AGPAT5 GS1-24F4.2 XKR5 MIR4659B MCPH1 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | MCPH1-AS1 MIR4659A DEFB1 AGPAT5 GS1-24F4.2 XKR5 MIR4659B |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | MIR4659A DEFB1 DEFA1 DEFT1P2 AGPAT5 DEFA8P GS1-24F4.2 MIR4659B DEFA5 DEFA10P DEFA1B DEFA3 DEFT1P DEFA9P XKR5 DEFA6 DEFA11P DEFA7P DEFA4 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFA1 DEFB105B AGPAT5 DEFB103A FAM66B USP17L8 DEFA10P USP17L4 DEFB105A FAM66E DEFT1P XKR5 ZNF705G DEFA4 LOC101928095 PRR23D2 USP17L1 DEFB106A FAM90A10P DEFB104B OR7E125P LINC00965 DEFA3 DEFA6 DEFA7P DEFB4B DEFB109P1B SPAG11A DEFB108P1 LOC107986910 DEFA5 DEFB107A LOC101929400 FAM90A7P DEFA9P DEFB103B USP17L3 DEFB104A DEFB106B OR7E154P DEFB107B MIR4659A DEFB1 DEFT1P2 ZNF705B PRR23D1 DEFA8P GS1-24F4.2 MIR4659B DEFA1B SPAG11B DEFB4A DEFA11P |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MCPH1-AS1 MIR4659A AGPAT5 XKR5 MIR4659B |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |