Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | AGPAT5 ANGPT2 XKR5 GS1-24F4.2 DEFA8P DEFA4 MIR4659B MCPH1 DEFB1 MIR8055 DEFA6 MIR4659A MCPH1-AS1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | AGPAT5 MIR4659B ANGPT2 XKR5 MCPH1 DEFB1 MIR8055 GS1-24F4.2 MIR4659A MCPH1-AS1 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | AGPAT5 MIR4659B XKR5 MCPH1 MIR8055 MIR4659A MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | AGPAT5 MIR4659B ANGPT2 XKR5 MCPH1 DEFB1 MIR8055 GS1-24F4.2 MIR4659A MCPH1-AS1 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | AGPAT5 MIR4659B XKR5 DEFB1 GS1-24F4.2 MIR4659A MCPH1-AS1 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | AGPAT5 DEFT1P2 DEFA5 DEFA3 XKR5 GS1-24F4.2 DEFA11P DEFA8P DEFA1 DEFA10P DEFA4 MIR4659B DEFA7P DEFB1 DEFA9P DEFA6 MIR4659A DEFA1B DEFT1P |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | USP17L3 DEFB106A OR7E125P XKR5 DEFA10P PRR23D2 DEFA7P DEFB4A DEFB1 DEFB104A DEFA9P LOC101929400 DEFB107B FAM90A7P PRR23D1 DEFB103B DEFT1P2 DEFA3 SPAG11B USP17L1 GS1-24F4.2 DEFA8P DEFA1 DEFA4 ZNF705B FAM90A10P DEFB108P1 DEFB109P1B LINC00965 LOC107986910 MIR4659A OR7E154P DEFT1P DEFB107A DEFB106B FAM66E FAM66B DEFA11P DEFB104B SPAG11A DEFA6 AGPAT5 ZNF705G DEFA5 USP17L8 DEFB4B LOC101928095 DEFB103A MIR4659B DEFB105B USP17L4 DEFB105A DEFA1B |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | AGPAT5 MIR4659B XKR5 MIR4659A MCPH1-AS1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |