Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | NP_065701.2 | ||
XM_005259089.3 | XP_005259146.1 | |||
XM_011527143.1 | XP_011525445.1 | |||
XM_017027023.1 | XP_016882512.1 | |||
AF183423.1 | AAG09692.1 | |||
AY195859.1 | AAO43054.1 | |||
AY358423.1 | AAQ88789.1 | |||
BC013436.1 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | SLC17A7 NTF4 PLA2G4C-AS1 TRPM4 SNAR-B1 SNAR-A4 SNAR-G1 SNORD34 KCNA7 GRWD1 ATF5 CA11 SNAR-A9 CPT1C PTOV1-AS1 CCDC155 PRR12 SNAR-A11 NTN5 DBP FAM83E CCDC114 RPL13A SNAR-A8 CD37 MIR4749 BCL2L12 SNORD35A LHB SIGLEC16 PIH1D1 FUT1 FTL NUP62 SNAR-A1 SNORD35B ALDH16A1 C19orf68 SNAR-B2 PRRG2 SPHK2 MED25 SNAR-A13 SIGLEC11 SNAR-D RCN3 TBC1D17 RUVBL2 RRAS RPL18 SCAF1 TMEM143 CARD8 GFY FGF21 LOC101928295 IL4I1 PPFIA3 BAX DHDH FUZ MIR6798 EMP3 CGB3 LIG1 SNAR-C1 LMTK3 HRC SNAR-C2 SEC1P PTOV1-AS2 TEAD2 ELSPBP1 MIR6799 IZUMO1 FCGRT PTOV1 PRMT1 SNAR-A5 PPP1R15A DKKL1 CGB2 ZNF114 LIN7B GRIN2D VRK3 TULP2 CARD8-AS1 CYTH2 LOC105447645 FUT2 CABP5 SNAR-C4 PLEKHA4 SNRNP70 NUCB1 C19orf73 NOSIP NUCB1-AS1 LOC101059948 MIR4751 TSKS SYNGR4 MIR6800 CGB7 PTH2 SULT2B1 SNAR-A12 IRF3 LOC105372430 SNAR-G2 SNAR-A7 SPACA4 SNAR-A10 GYS1 ZNF473 FLJ26850 MIR4750 AKT1S1 RPS11 FLT3LG MAMSTR SNAR-C5 CGB5 CGB1 PNKP PLA2G4C CGB8 AP2A1 HSD17B14 SNORD33 ADM5 SLC6A16 SNAR-A6 MIR150 SNORD32A MIR4324 LOC100287477 BSPH1 BCAT2 SNAR-A14 MIR5088 SNAR-A3 SNAR-C3 RASIP1 SNAR-A2 KDELR1 KCNJ14 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | SNORD35B SNORD33 FCGRT MIR150 SNORD32A RPL13A SNORD34 PRRG2 RPS11 NOSIP SNORD35A FLT3LG RCN3 PRR12 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD35B SNORD33 FCGRT ALDH16A1 MIR150 SNORD32A RPL13A SNORD34 RPS11 NOSIP SNORD35A FLT3LG RCN3 PIH1D1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | MIR6799 SNORD35B FCGRT SNORD34 PRRG2 PRMT1 RPS11 MED25 RCN3 CPT1C PTOV1-AS1 PRR12 RRAS SCAF1 AP2A1 SNORD33 ADM5 MIR150 SNORD32A RPL13A FUZ BCL2L12 NOSIP SNORD35A TSKS MIR6800 MIR5088 IRF3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |