Assay Details
Target Gene Details
Entrez Gene ID: | 79701 |
Gene Name: | 2-oxoglutarate and iron dependent oxygenase domain containing 3 |
Gene Aliases: |
C17orf101 |
Location: |
Chr.17:82389210-82418637 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OGFOD3 | NM_024648.2 | NP_078924.1 | ||
NM_175902.4 | NP_787098.3 | |||
NR_033265.1 | ||||
AK025875.1 | BAB15267.1 | |||
AK311057.1 | ||||
BC008897.1 | AAH08897.1 | |||
BC023602.2 | AAH23602.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1059334 | Chr.17:82277007 - 82411683 on Build GRCh38 | Gain | LOC101929511 LOC105376790 UTS2R CD7 TEX19 OGFOD3 SECTM1 |
nsv833573 | Chr.17:82275053 - 82406183 on Build GRCh38 | Loss | LOC101929511 LOC105376790 UTS2R CD7 TEX19 OGFOD3 SECTM1 |
esv2760445 | Chr.17:82267669 - 82421456 on Build GRCh38 | Gain | LOC101929511 LOC105376790 UTS2R CD7 TEX19 CSNK1D OGFOD3 SECTM1 HEXDC |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | P4HB FOXK2 STRA13 PPP1R27 OXLD1 RAB40B CCDC137 HGS PYCR1 ARHGDIA ZNF750 FSCN2 SECTM1 FN3KRP LOC105371925 LOC101929511 LRRC45 TEX19 PDE6G FASN MAFG AATK FAAP100 B3GNTL1 CCDC57 GPS1 UTS2R CD7 BAHCC1 SLC38A10 MRPL12 MIR6786 LOC100130370 CEP131 WDR45B MCRIP1 PCYT2 TEPSIN OGFOD3 ARL16 MIR3186 HEXDC DUS1L ANAPC11 C17orf89 MIR4525 LINC00482 SLC25A10 LOC105371944 DCXR ACTG1 NOTUM LOC105376790 NARF MAFG-AS1 ASPSCR1 MIR4740 GCGR TSPAN10 SNORD134 SIRT7 RAC3 NPLOC4 SLC16A3 TMEM105 NPB LOC105376791 FN3K MYADML2 RFNG LOC101929552 C17orf62 CSNK1D AATK-AS1 MIR6787 ALYREF TBCD |
nsv1067160 | Chr.17:82381853 - 82446450 on Build GRCh38 | Loss | LOC105376790 C17orf62 OGFOD3 HEXDC |
nsv828143 | Chr.17:82400094 - 82429642 on Build GRCh38 | Loss | OGFOD3 HEXDC |
nsv469561 | Chr.17:82251148 - 82472274 on Build GRCh38 | Loss | LOC101929511 LOC105376790 NARF UTS2R CD7 TEX19 C17orf62 CSNK1D OGFOD3 SECTM1 HEXDC |
nsv952394 | Chr.17:82297625 - 82408424 on Build GRCh38 | Deletion | LOC105376790 UTS2R CD7 TEX19 OGFOD3 SECTM1 |
nsv1067194 | Chr.17:82294731 - 82653129 on Build GRCh38 | Gain | LOC105376790 NARF UTS2R CD7 FOXK2 WDR45B TEX19 C17orf62 OGFOD3 SECTM1 HEXDC |
esv2762577 | Chr.17:82244836 - 82838431 on Build GRCh38 | Gain+Loss | LOC101929511 LOC105376790 NARF FOXK2 WDR45B TEX19 RAB40B OGFOD3 HEXDC LOC105376791 FN3K UTS2R CD7 LOC101929552 MIR4525 ZNF750 C17orf62 CSNK1D TBCD SECTM1 FN3KRP |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | P4HB FOXK2 STRA13 PPP1R27 RAB40B PYCR1 ARHGDIA ZNF750 SECTM1 FN3KRP LOC101929511 METRNL LRRC45 TEX19 FASN MAFG B3GNTL1 CCDC57 GPS1 UTS2R CD7 WDR45B MCRIP1 PCYT2 OGFOD3 HEXDC DUS1L ANAPC11 MIR4525 LOC105371944 DCXR NOTUM LOC105376790 NARF MAFG-AS1 ASPSCR1 SNORD134 SIRT7 RAC3 SLC16A3 NPB LOC105376791 FN3K MYADML2 RFNG LOC101929552 C17orf62 CSNK1D MIR6787 ALYREF TBCD |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |