Assay Details
Target Gene Details
Entrez Gene ID: | 162394 |
Gene Name: | schlafen family member 5 |
Gene Aliases: |
- |
Location: |
Chr.17:35243026-35273650 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLFN5 | NM_144975.3 | NP_659412.3 | ||
XM_005257934.3 | XP_005257991.1 | |||
AK054668.1 | BAB70788.1 | |||
AK303299.1 | ||||
AK303632.1 | ||||
BC125200.1 | ||||
BC125201.1 | ||||
BX647942.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422399 | Chr.17:35212221 - 35291582 on Build GRCh38 | Deletion | SLFN5 LOC105371932 |
esv3892998 | Chr.17:35106468 - 35295755 on Build GRCh38 | Loss | FNDC8 RAD51D RAD51L3-RFFL SLC35G3 SLFN5 NLE1 LOC105371932 UNC45B |
esv3892999 | Chr.17:35252863 - 35925533 on Build GRCh38 | Loss | RDM1 RASL10B MMP28 C17orf50 SLFN12L SNORD7 SLFN5 SLFN13 LOC105371933 LOC105371743 GAS2L2 HEATR9 SLFN11 CCL5 AP2B1 SLFN12 LRRC37A8P PEX12 TAF15 SLFN14 |
nsv574741 | Chr.17:35225256 - 35500115 on Build GRCh38 | Loss | SLFN11 SLFN12 SLFN12L SLFN5 SLFN13 LOC105371933 LOC105371932 |
More Information
Additional Information:
For this assay, SNP(s) [rs115340692] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |