Assay Details
Target Gene Details
Entrez Gene ID: | 9536 |
Gene Name: | prostaglandin E synthase |
Gene Aliases: |
MGST-IV, MGST1-L1, MGST1L1, MPGES, PGES, PIG12, PP102, PP1294, TP53I12, mPGES-1 |
Location: |
Chr.9:129738336-129777579 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTGES | XM_011519210.2 | XP_011517512.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv23022 | Chr.9:129764226 - 129767505 on Build GRCh38 | Loss | PTGES |
nsv1046477 | Chr.9:129608081 - 129997996 on Build GRCh38 | Gain | MIR6855 FNBP1 ASB6 PTGES TOR1B TOR1A NTMT1 PRRX2-AS1 PRRX2 USP20 C9orf78 C9orf50 |
esv3621839 | Chr.9:129701704 - 129885823 on Build GRCh38 | Loss | MIR6855 PTGES TOR1B TOR1A PRRX2-AS1 PRRX2 USP20 C9orf78 |
nsv436625 | Chr.9:129762543 - 129768628 on Build GRCh38 | Deletion | PTGES |
esv3621844 | Chr.9:129764130 - 129768243 on Build GRCh38 | Loss | PTGES |
nsv6728 | Chr.9:129752333 - 129784235 on Build GRCh38 | Deletion | PTGES |
dgv1380e199 | Chr.9:129763416 - 129768463 on Build GRCh38 | Deletion | PTGES |
nsv515126 | Chr.9:129764204 - 129765660 on Build GRCh38 | Loss | PTGES |
More Information
Additional Information:
For this assay, SNP(s) [rs112145353] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |