Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | MIR8055 AGPAT5 MIR4659A ANGPT2 DEFA8P GS1-24F4.2 MCPH1 XKR5 DEFB1 DEFA6 DEFA4 MIR4659B MCPH1-AS1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MIR8055 AGPAT5 MIR4659A MCPH1 XKR5 ANGPT2 DEFB1 MIR4659B MCPH1-AS1 GS1-24F4.2 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MIR8055 AGPAT5 MIR4659A MCPH1 XKR5 MIR4659B MCPH1-AS1 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MIR8055 AGPAT5 MIR4659A MCPH1 XKR5 ANGPT2 DEFB1 MIR4659B MCPH1-AS1 GS1-24F4.2 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | AGPAT5 MIR4659A XKR5 DEFB1 MIR4659B MCPH1-AS1 GS1-24F4.2 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFT1P2 AGPAT5 DEFA1 MIR4659A DEFA8P GS1-24F4.2 DEFA9P DEFA11P DEFA7P DEFT1P XKR5 DEFB1 DEFA3 DEFA6 DEFA1B DEFA5 DEFA4 MIR4659B DEFA10P |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | AGPAT5 DEFA1 DEFB103A LOC107986910 LINC00965 LOC101929400 FAM66B DEFA9P OR7E154P DEFA7P FAM66E ZNF705G DEFB108P1 MIR4659A DEFB104B DEFB103B DEFB4A DEFB105B DEFT1P PRR23D2 USP17L4 SPAG11A DEFB105A DEFB4B USP17L1 USP17L8 DEFA8P SPAG11B LOC101928095 XKR5 DEFB1 DEFB106A DEFA1B DEFA4 ZNF705B DEFB109P1B USP17L3 DEFT1P2 DEFB106B OR7E125P FAM90A7P DEFB107B GS1-24F4.2 DEFA11P DEFA3 DEFA6 PRR23D1 FAM90A10P DEFA5 DEFB104A MIR4659B DEFA10P DEFB107A |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | AGPAT5 MIR4659A XKR5 MIR4659B MCPH1-AS1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |