Assay Details
Target Gene Details
Entrez Gene ID: | 29072 |
Gene Name: | SET domain containing 2 |
Gene Aliases: |
HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A, LLS, SET2, p231HBP |
Location: |
Chr.3:47016408-47164109 on Build GRCh38 |
Assay Gene Location: | Within Exon 24 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SETD2 | NM_014159.6 | 21 | 8294 | NP_054878.5 |
XM_011533631.2 | 22 | 9790 | XP_011531933.1 | |
XM_011533632.2 | 21 | 8366 | XP_011531934.1 | |
XM_011533633.2 | 21 | 9657 | XP_011531935.1 | |
XM_011533634.1 | 21 | 8319 | XP_011531936.1 | |
XM_017006270.1 | 19 | 9493 | XP_016861759.1 | |
AB051519.2 | 19 | 6294 | BAB21823.2 | |
AI671342.1 | 1 | 159 | ||
AK026837.1 | 7 | 1952 | ||
AK095494.1 | 14 | 2750 | ||
AL049470.1 | 1 | 2129 | ||
AL713692.1 | 7 | 1560 | CAD28492.1 | |
AL831959.1 | 19 | 7436 | CAD38601.2 | |
BC090954.1 | 19 | 6084 | AAH90954.1 | |
BC117162.1 | ||||
BC117164.1 | ||||
BF437034.1 | 1 | 132 | ||
BX649110.1 | 19 | 8061 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv997261 | Chr.3:47013276 - 47092190 on Build GRCh38 | Gain | SETD2 NRADDP |
nsv428417 | Chr.3:46638962 - 47778557 on Build GRCh38 | Loss | PTPN23 PRSS42 PTH1R SCAP SETD2 KIF9-AS1 NBEAL2 ELP6 KIF9 ALS2CL KLHL18 MYL3 TMIE CCDC12 SNORD13P3 PRSS50 SMARCC1 PRSS43 PRSS46 CSPG5 PRSS45 NRADDP |
esv3596073 | Chr.3:46936296 - 47131646 on Build GRCh38 | Loss | CCDC12 SETD2 NBEAL2 NRADDP |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |