Assay Details
Target Gene Details
Entrez Gene ID: | 60343 |
Gene Name: | family with sequence similarity 3 member A |
Gene Aliases: |
2.19, DLD, DXS560S, XAP-7 |
Location: |
Chr.X:154506159-154516249 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 4 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33784 | Chr.X:153962665 - 155699588 on Build GRCh38 | Gain+Loss | MIR3202-1 VBP1 TEX28 FAM223B F8A1 CH17-340M24.3 BRCC3 MIR6858 TAZ CLIC2 UBL4A FLNA MIR664B MTCP1 FUNDC2 MPP1 MIR3202-2 OPN1LW LOC107987332 OPN1MW2 H2AFB2 PLXNA3 FAM50A FAM3A FAM223A MIR1184-3 RPL10 H2AFB1 SMIM9 SPRY3 G6PD MIR1184-2 DNASE1L1 LOC101927830 IRAK1 ATP6AP1 TKTL1 CMC4 F8A3 TMLHE MIR718 LOC105373386 SLC10A3 DKC1 H2AFB3 RAB39B MECP2 OPN1MW SNORA70 CTAG1A CTAG1B MIR1184-1 CTAG2 SNORA56 GAB3 HCFC1 F8 GDI1 HCFC1-AS1 IKBKG F8A2 EMD TMLHE-AS1 LAGE3 SNORA36A OPN1MW3 TMEM187 |
nsv519042 | Chr.X:154082978 - 154601444 on Build GRCh38 | Gain | TKTL1 TEX28 CH17-340M24.3 MIR6858 LOC105373386 TAZ SLC10A3 UBL4A FLNA MECP2 OPN1MW SNORA70 CTAG1A OPN1LW LOC107987332 OPN1MW2 PLXNA3 FAM50A GDI1 FAM3A FAM223A IKBKG EMD RPL10 LAGE3 G6PD OPN1MW3 DNASE1L1 ATP6AP1 |
esv33199 | Chr.X:153065734 - 154591978 on Build GRCh38 | Gain+Loss | MIR3202-1 TEX28 CH17-340M24.3 NAA10 PNMA6A MIR6858 TAZ PNCK SLC6A8 IDH3G UBL4A ATP2B3 FLNA LOC105373383 LOC105373377 AVPR2 ABCD1 LOC105373378 TREX2 MIR3202-2 OPN1LW LOC107987332 OPN1MW2 PLXNA3 ZNF275 FAM50A SRPK3 FAM3A FAM223A RPL10 G6PD L1CAM PDZD4 DNASE1L1 IRAK1 ATP6AP1 TKTL1 HAUS7 PLXNB3 LCA10 MIR718 LOC105373386 SLC10A3 MECP2 OPN1MW ZFP92 SNORA70 CTAG1A FAM58A LOC107983954 DUSP9 BGN HCFC1 ARHGAP4 BCAP31 SSR4 GDI1 HCFC1-AS1 IKBKG LOC105373381 EMD LAGE3 MAGEA1 RENBP OPN1MW3 TMEM187 |
nsv508816 | Chr.X:154492171 - 154591783 on Build GRCh38 | Insertion | FAM223A IKBKG CTAG1A G6PD FAM3A |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |