Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 22 - Exon 22 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | NP_001139433.1 | ||
NM_001145962.1 | NP_001139434.1 | |||
NM_001145963.1 | NP_001139435.1 | |||
NM_001145964.1 | NP_001139436.1 | |||
NM_005072.4 | NP_005063.1 | |||
AF047338.1 | AAC32815.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | ||||
AK097808.1 | ||||
AK293906.1 | ||||
AK293956.1 | ||||
AK299042.1 | ||||
AK302790.1 | ||||
AK316415.1 | ||||
AY026038.1 | AAK01946.1 | |||
BC021193.2 | AAH21193.1 | |||
U55054.1 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | EDC4 PARD6A GFOD2 PSMB10 NRN1L LRRC29 SLC9A5 HSF4 HSD11B2 PLEKHG4 NUTF2 ELMO3 LOC107984813 DDX28 TRADD MIR328 DUS2 AGRP LOC100505942 ATP6V0D1 ZDHHC1 TPPP3 ACD DPEP3 THAP11 LRRC36 PSKH1 FHOD1 RANBP10 LOC100131303 KIAA0895L FBXL8 TMEM208 FAM65A TSNAXIP1 LCAT NOL3 EXOC3L1 KCTD19 LOC105369155 CTCF DPEP2 ENKD1 CARMIL2 CENPT CTRL SLC12A4 C16orf86 E2F4 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | EDC4 PARD6A GFOD2 PSMB10 NRN1L LRRC29 C16orf70 SLC9A5 HSF4 HSD11B2 PLEKHG4 NUTF2 ELMO3 LOC107984813 DDX28 TRADD MIR328 DUS2 AGRP LOC100505942 ATP6V0D1 ZDHHC1 TPPP3 ACD DPEP3 THAP11 LRRC36 PSKH1 FHOD1 RANBP10 LOC100131303 KIAA0895L FBXL8 TMEM208 FAM65A TSNAXIP1 LCAT NOL3 EXOC3L1 KCTD19 LOC105369155 B3GNT9 CTCF DPEP2 ENKD1 CARMIL2 CENPT CTRL SLC12A4 C16orf86 E2F4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |