Assay Details
Target Gene Details
Entrez Gene ID: | 60343 |
Gene Name: | family with sequence similarity 3 member A |
Gene Aliases: |
2.19, DLD, DXS560S, XAP-7 |
Location: |
Chr.X:154506159-154516249 on Build GRCh38 |
Assay Gene Location: | Within Exon 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM3A | NM_001171132.2 | 10 | 1029 | NP_001164603.1 |
NM_001171133.2 | 9 | 915 | NP_001164604.1 | |
NM_001171134.2 | 8 | 1075 | NP_001164605.1 | |
NM_001282311.1 | 10 | 1224 | NP_001269240.1 | |
NM_001282312.1 | 10 | 970 | NP_001269241.1 | |
NM_021806.3 | 9 | 1126 | NP_068578.2 | |
XM_005274714.3 | 11 | 1095 | XP_005274771.1 | |
XM_005274716.3 | 11 | 1074 | XP_005274773.1 | |
XM_005277879.4 | 9 | 984 | XP_005277936.1 | |
XM_006724831.2 | 11 | 1098 | XP_006724894.1 | |
XM_006724832.3 | 10 | 1059 | XP_006724895.1 | |
XM_006724833.2 | 10 | 1023 | XP_006724896.1 | |
XM_006724834.2 | 10 | 1211 | XP_006724897.1 | |
XM_011531185.2 | 8 | 656 | XP_011529487.1 | |
XM_017029699.1 | 9 | 1371 | XP_016885188.1 | |
XM_017029700.1 | 9 | 1346 | XP_016885189.1 | |
XM_017029701.1 | 10 | 1249 | XP_016885190.1 | |
XM_017029702.1 | 9 | 862 | XP_016885191.1 | |
AK024601.1 | 10 | 987 | ||
AK057945.1 | 10 | 844 | ||
AK124890.1 | 6 | 3317 | ||
AK294116.1 | 8 | 1038 | ||
AK314682.1 | 9 | 1044 | ||
BC002934.1 | 10 | 1128 | AAH02934.1 | |
BC008912.2 | 9 | 777 | AAH08912.1 | |
CX867071.1 | ||||
X87193.1 | 9 | 933 | CAA60645.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33784 | Chr.X:153962665 - 155699588 on Build GRCh38 | Gain+Loss | DNASE1L1 VBP1 MPP1 OPN1MW G6PD IRAK1 LOC107987332 MIR1184-3 OPN1MW2 IKBKG CMC4 SMIM9 F8A1 LAGE3 FUNDC2 MIR6858 H2AFB2 CTAG1A MIR664B FAM50A F8 F8A2 RPL10 LOC105373386 CH17-340M24.3 MIR1184-1 GAB3 MIR3202-1 FAM3A TKTL1 MTCP1 SPRY3 TMEM187 RAB39B TMLHE OPN1LW CTAG1B ATP6AP1 SNORA56 H2AFB3 DKC1 LOC101927830 BRCC3 SNORA36A MIR718 FLNA F8A3 CTAG2 HCFC1-AS1 FAM223B OPN1MW3 TEX28 MIR3202-2 TAZ MECP2 SLC10A3 GDI1 TMLHE-AS1 FAM223A EMD H2AFB1 UBL4A HCFC1 PLXNA3 SNORA70 MIR1184-2 CLIC2 |
nsv519042 | Chr.X:154082978 - 154601444 on Build GRCh38 | Gain | OPN1LW DNASE1L1 ATP6AP1 OPN1MW G6PD LOC107987332 OPN1MW2 IKBKG LAGE3 MIR6858 FLNA CTAG1A FAM50A RPL10 OPN1MW3 LOC105373386 CH17-340M24.3 TEX28 FAM3A TKTL1 TAZ MECP2 SLC10A3 GDI1 FAM223A EMD UBL4A PLXNA3 SNORA70 |
esv33199 | Chr.X:153065734 - 154591978 on Build GRCh38 | Gain+Loss | LOC107983954 PNCK PDZD4 DNASE1L1 PNMA6A L1CAM MAGEA1 OPN1MW G6PD SRPK3 IRAK1 LOC107987332 ARHGAP4 OPN1MW2 LOC105373383 IKBKG TREX2 LAGE3 SLC6A8 MIR6858 ABCD1 CTAG1A FAM50A RPL10 NAA10 RENBP LOC105373386 CH17-340M24.3 MIR3202-1 FAM3A TKTL1 TMEM187 DUSP9 HAUS7 PLXNB3 LOC105373377 OPN1LW ATP6AP1 IDH3G LCA10 LOC105373381 LOC105373378 MIR718 FLNA BCAP31 FAM58A HCFC1-AS1 ATP2B3 OPN1MW3 TEX28 SSR4 MIR3202-2 ZFP92 TAZ MECP2 ZNF275 BGN SLC10A3 GDI1 FAM223A EMD AVPR2 UBL4A HCFC1 PLXNA3 SNORA70 |
nsv508816 | Chr.X:154492171 - 154591783 on Build GRCh38 | Insertion | FAM3A CTAG1A IKBKG FAM223A G6PD |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |