Assay Details
Target Gene Details
Entrez Gene ID: | 157724 |
Gene Name: | solute carrier family 7 member 13 |
Gene Aliases: |
AGT-1, AGT1, XAT2 |
Location: |
Chr.8:86213909-86230380 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC7A13 | NM_138817.2 | 4 | 1486 | NP_620172.2 |
XM_011516867.1 | 4 | 1464 | XP_011515169.1 | |
AJ417661.1 | CAD10393.1 | |||
AK055815.1 | 4 | 1486 | BAB71021.1 | |
BC125165.1 | ||||
BC125166.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2761445 | Chr.8:86173241 - 86322968 on Build GRCh38 | Gain | SLC7A13 |
nsv519507 | Chr.8:86174966 - 86321739 on Build GRCh38 | Gain+Loss | SLC7A13 |
nsv6290 | Chr.8:86163511 - 86217579 on Build GRCh38 | Deletion | SLC7A13 |
nsv428204 | Chr.8:85493249 - 86299979 on Build GRCh38 | Gain | LOC100288562 LOC107986879 SLC7A13 ATP6V0D2 PSKH2 LOC101929627 REXO1L2P LOC101929601 REXO1L1P |
dgv7263n100 | Chr.8:86149208 - 86325031 on Build GRCh38 | Gain | SLC7A13 ATP6V0D2 |
esv3617906 | Chr.8:86189102 - 86323318 on Build GRCh38 | Gain | SLC7A13 |
dgv12228n54 | Chr.8:86174821 - 86321739 on Build GRCh38 | Gain | SLC7A13 |
nsv611674 | Chr.8:86143943 - 86303691 on Build GRCh38 | Gain | SLC7A13 ATP6V0D2 |
More Information
Additional Information:
For this assay, SNP(s) [rs56993779] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |