Assay Details
Target Gene Details
Entrez Gene ID: | 284340 |
Gene Name: | C-X-C motif chemokine ligand 17 |
Gene Aliases: |
DMC, Dcip1, UNQ473, VCC-1, VCC1 |
Location: |
Chr.19:42428538-42443048 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CXCL17 | NM_198477.2 | 4 | 796 | NP_940879.1 |
NR_133910.1 | 4 | 813 | ||
AY358433.1 | 4 | 732 | AAQ88799.1 | |
AY598464.1 | 4 | 796 | AAU04875.1 | |
BM978124.1 | 1 | 139 | ||
BU684368.1 | 1 | 143 |
Target Gene Details
Entrez Gene ID: | 100996307 |
Gene Name: | LIPE antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:42397148-42652355 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LIPE-AS1 | NR_073179.1 | |||
NR_073180.1 | ||||
AK096849.1 | BAC04875.1 | |||
AK310497.1 | ||||
AK311181.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv526186 | Chr.19:42172329 - 42699355 on Build GRCh38 | Gain | CEACAM8 LIPE LOC101930071 LIPE-AS1 ZNF526 PRR19 CXCL17 CNFN MIR8077 CIC POU2F2 ERF DEDD2 PAFAH1B3 MEGF8 TMEM145 CEACAM1 GSK3A |
esv2422471 | Chr.19:42228989 - 43165333 on Build GRCh38 | Deletion | PSG8 PSG7 PSG2 PSG1 CEACAM8 LIPE PSG3 LOC101930071 LIPE-AS1 PRR19 CXCL17 CNFN MIR8077 CIC ERF PAFAH1B3 MEGF8 PSG11 PSG6 TMEM145 LOC100289650 CEACAM1 GSK3A PSG10P |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |