Assay Details
Target Gene Details
Entrez Gene ID: | 146712 |
Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 |
Gene Aliases: |
3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1 |
Location: |
Chr.17:82942149-83051845 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B3GNTL1 | NM_001009905.2 | 13 | 2711 | NP_001009905.1 |
NM_001320742.1 | 14 | 2829 | NP_001307671.1 | |
NM_001320743.1 | 9 | 3306 | NP_001307672.1 | |
NR_135465.1 | 14 | 3066 | ||
NR_135466.1 | 10 | 2138 | ||
AA764879.1 | ||||
AK054757.1 | 10 | 2138 | ||
BU623325.1 | 1 | 325 |
Target Gene Details
Entrez Gene ID: | 6904 |
Gene Name: | tubulin folding cofactor D |
Gene Aliases: |
SSD-1, tfcD |
Location: |
Chr.17:82752048-82943186 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 55 - Exon 56 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1067553 | Chr.17:82530808 - 83091923 on Build GRCh38 | Loss | FN3K TBCD FN3KRP B3GNTL1 MIR4525 WDR45B METRNL RAB40B LOC105376791 FOXK2 ZNF750 LOC105371944 LOC101929552 |
dgv3296n100 | Chr.17:82851564 - 83091923 on Build GRCh38 | Gain | METRNL TBCD B3GNTL1 LOC105371944 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | FN3K TBCD SLC16A3 RAC3 HGS FN3KRP MRPL12 ARHGDIA NPLOC4 TEX19 RAB40B LOC105376791 HEXDC STRA13 AATK-AS1 ALYREF UTS2R DUS1L LOC101929511 NPB PCYT2 LOC105376790 ARL16 SIRT7 GPS1 ACTG1 MCRIP1 ASPSCR1 CCDC57 OXLD1 CSNK1D FSCN2 LINC00482 PPP1R27 ZNF750 SECTM1 LOC101929552 CEP131 MIR4740 B3GNTL1 CCDC137 DCXR AATK MIR6787 MIR6786 MIR4525 C17orf89 NARF FASN LRRC45 MAFG-AS1 WDR45B ANAPC11 P4HB SLC25A10 C17orf62 FAAP100 PYCR1 FOXK2 MIR3186 LOC105371944 TMEM105 GCGR RFNG PDE6G LOC105371925 CD7 MYADML2 SNORD134 NOTUM TSPAN10 BAHCC1 MAFG TEPSIN OGFOD3 LOC100130370 SLC38A10 |
nsv576217 | Chr.17:82937869 - 82960820 on Build GRCh38 | Loss | TBCD B3GNTL1 LOC105371944 |
dgv3297n100 | Chr.17:82879855 - 83048753 on Build GRCh38 | Gain | TBCD B3GNTL1 LOC105371944 |
esv3893052 | Chr.17:82895301 - 83102003 on Build GRCh38 | Gain | METRNL TBCD B3GNTL1 LOC105371944 |
nsv1057153 | Chr.17:82876571 - 83091923 on Build GRCh38 | Loss | METRNL TBCD B3GNTL1 LOC105371944 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | FN3K TBCD SLC16A3 RAC3 FN3KRP ARHGDIA TEX19 RAB40B LOC105376791 HEXDC STRA13 ALYREF UTS2R DUS1L LOC101929511 NPB PCYT2 LOC105376790 SIRT7 GPS1 MCRIP1 ASPSCR1 CCDC57 CSNK1D PPP1R27 ZNF750 SECTM1 LOC101929552 B3GNTL1 DCXR MIR6787 MIR4525 NARF FASN LRRC45 MAFG-AS1 WDR45B METRNL ANAPC11 P4HB C17orf62 PYCR1 FOXK2 LOC105371944 RFNG CD7 MYADML2 SNORD134 NOTUM MAFG OGFOD3 |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |