Assay Details
Target Gene Details
Entrez Gene ID: | 79680 |
Gene Name: | chromosome 22 open reading frame 29 |
Gene Aliases: |
BOP |
Location: |
Chr.22:19846138-19854848 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
C22orf29 | NM_024627.5 | 3 | 4236 | NP_078903.3 |
AK026924.1 | 1 | 183 | ||
BX640785.1 | 2 | 4325 | CAE45875.1 | |
BX640969.1 | 3 | 4205 | CAE45984.1 | |
BX640998.1 | 3 | 4205 | CAE46001.1 |
Target Gene Details
Entrez Gene ID: | 54584 |
Gene Name: | G protein subunit beta 1 like |
Gene Aliases: |
DGCRK3, FKSG1, GY2, WDR14, WDVCF |
Location: |
Chr.22:19788411-19854939 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1L | NM_053004.2 | NP_443730.1 | ||
AB051432.1 | ||||
AF238328.1 | AAG36826.1 | |||
AF301895.1 | AAG53933.1 | |||
AY007378.1 | AAG12162.1 | |||
BC012060.1 | AAH12060.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834129 | Chr.22:19705617 - 19919068 on Build GRCh38 | Loss | SEPT5 GNB1L TBX1 SEPT5-GP1BB C22orf29 TXNRD2 GP1BB |
nsv953024 | Chr.22:19842078 - 19854877 on Build GRCh38 | Deletion | GNB1L C22orf29 |
esv3893434 | Chr.22:19470889 - 20343372 on Build GRCh38 | Gain | DGCR6L MIR185 LOC284865 LINC00895 TANGO2 ARVCF TBX1 RTN4R LINC00896 TXNRD2 MIR4761 GP1BB CDC45 UFD1L SEPT5 MIR1306 CCDC188 MIR6816 LOC440792 COMT GNB1L SEPT5-GP1BB CLDN5 RANBP1 C22orf29 LOC101927859 MIR1286 TRMT2A ZDHHC8 MIR3618 DGCR8 |
nsv828939 | Chr.22:19696032 - 20324465 on Build GRCh38 | Loss | DGCR6L MIR185 LOC284865 TANGO2 ARVCF TBX1 RTN4R LINC00896 TXNRD2 MIR4761 GP1BB SEPT5 MIR1306 CCDC188 MIR6816 LOC440792 COMT GNB1L SEPT5-GP1BB RANBP1 C22orf29 MIR1286 TRMT2A ZDHHC8 MIR3618 DGCR8 |
nsv828938 | Chr.22:19691069 - 20324465 on Build GRCh38 | Gain | DGCR6L MIR185 LOC284865 TANGO2 ARVCF TBX1 RTN4R LINC00896 TXNRD2 MIR4761 GP1BB SEPT5 MIR1306 CCDC188 MIR6816 LOC440792 COMT GNB1L SEPT5-GP1BB RANBP1 C22orf29 MIR1286 TRMT2A ZDHHC8 MIR3618 DGCR8 |
nsv834130 | Chr.22:19837923 - 19940567 on Build GRCh38 | Loss | GNB1L C22orf29 TXNRD2 |
esv3568260 | Chr.22:19777375 - 19881883 on Build GRCh38 | Loss | GNB1L TBX1 C22orf29 TXNRD2 |
esv3647279 | Chr.22:19719848 - 19878980 on Build GRCh38 | Gain | SEPT5 GNB1L TBX1 SEPT5-GP1BB C22orf29 TXNRD2 GP1BB |
dgv7983n54 | Chr.22:19762002 - 20321870 on Build GRCh38 | Gain | DGCR6L MIR185 LOC284865 COMT GNB1L TANGO2 ARVCF TBX1 RTN4R RANBP1 LINC00896 C22orf29 TXNRD2 MIR1286 MIR4761 MIR1306 TRMT2A CCDC188 ZDHHC8 MIR6816 MIR3618 LOC440792 DGCR8 |
esv3575418 | Chr.22:18161776 - 19963846 on Build GRCh38 | Gain | TMEM191B GGT3P DGCR11 DGCR2 LINC00895 TBX1 FAM230A LINC01311 LOC100996415 TXNRD2 LOC100996432 CLTCL1 MIR4761 GP1BB CDC45 UFD1L SEPT5 TSSK2 RIMBP3 MRPL40 HIRA SLC25A1 COMT GNB1L DGCR10 PI4KAP1 SEPT5-GP1BB CLDN5 C22orf29 DGCR9 GSC2 DGCR14 DGCR5 LOC642643 USP18 DGCR6 PRODH C22orf39 LOC102725072 LOC729461 LOC100996401 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |