Assay Details
Target Gene Details
Entrez Gene ID: | 26121 |
Gene Name: | pre-mRNA processing factor 31 |
Gene Aliases: |
NY-BR-99, PRP31, RP11, SNRNP61 |
Location: |
Chr.19:54115410-54131719 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRPF31 | NM_015629.3 | NP_056444.3 | ||
XM_006723137.3 | XP_006723200.1 | |||
AB593024.1 | ||||
AB593025.1 | ||||
AF308303.1 | AAG48270.1 | |||
AK098547.1 | BAC05329.1 | |||
AK301709.1 | ||||
AL050369.1 | CAB43677.1 | |||
AY040822.1 | AAK77986.1 | |||
BC117389.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion | OSCAR PRPF31 TARM1 TFPT VSTM1 NDUFA3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | PRPF31 TMC4 TFPT NDUFA3 LENG1 CNOT3 MBOAT7 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | OSCAR PRPF31 TMC4 TSEN34 TFPT NDUFA3 LENG1 CNOT3 MBOAT7 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR526A1 PRPF31 LOC105372457 MIR519C MIR520E TARM1 MIR1283-2 MIR518D VSTM1 MIR527 LILRA5 MIR519E LOC284379 LILRB5 MIR517C MIR518F RPS9 VN1R2 MIR515-2 ZNF813 MIR520C DPRX ZNF331 LILRB3 CNOT3 MIR512-2 ZNF845 MIR522 LILRB2 MIR518B FAM90A27P MIR523 MYADM ZNF818P MIR520H MIR371A MIR516A2 PRKCG MBOAT7 MIR520G OSCAR MIR526A2 MIR519B BIRC8 MIR519A1 MIR518A1 MIR516A1 MIR517B TFPT MIR521-1 MIR516B2 MIR520F CACNG8 CACNG7 LILRA6 MIR518A2 MIR1323 MIR935 MIR525 MIR520A MIR372 MIR524 NDUFA3 NLRP12 MIR498 ZNF665 MIR373 MIR521-2 MIR520D MIR512-1 MIR518E MIR517A MIR1283-1 ZNF677 MIR515-1 CACNG6 ZNF765 MIR519A2 MIR516B1 TMC4 TSEN34 VN1R4 MIR518C MIR4752 MIR519D ZNF761 MIR371B MIR520B LENG1 ZNF525 MIR526B TPM3P9 |
nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss | OSCAR PRPF31 TARM1 TFPT NDUFA3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |