Assay Details
Target Gene Details
Entrez Gene ID: | 8888 |
Gene Name: | minichromosome maintenance complex component 3 associated protein |
Gene Aliases: |
GANP, MAP80, SAC3 |
Location: |
Chr.21:46235125-46286274 on Build GRCh38 |
Assay Gene Location: | Within Exon 25 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MCM3AP | NM_003906.4 | 24 | 5184 | NP_003897.2 |
XM_005261203.4 | 25 | 5760 | XP_005261260.1 | |
XM_005261204.4 | 25 | 5656 | XP_005261261.1 | |
XM_005261205.3 | 25 | 5272 | XP_005261262.1 | |
AB005543.1 | 9 | 1669 | BAA25170.1 | |
AB011144.1 | 24 | 4754 | BAA25498.1 | |
AJ010089.1 | 24 | 5113 | CAB52687.1 | |
AK026578.1 | 3 | 527 | ||
AK095181.1 | 4 | 2137 | ||
AK126313.1 | 14 | 3589 | ||
AK127239.1 | 14 | 3073 | ||
AK304208.1 | 24 | 4043 | ||
BC004497.2 | 5 | 834 | AAH04497.2 | |
BC013285.2 | 9 | 1470 | AAH13285.2 | |
BC104958.1 | 24 | 5152 | AAI04959.1 | |
BC104960.1 | 24 | 5152 | AAI04961.1 |
Target Gene Details
Entrez Gene ID: | 114044 |
Gene Name: | MCM3AP antisense RNA 1 |
Gene Aliases: |
C21orf85, MCM3AP-AS, MCM3APAS, MCM3APASB, NCRNA00031 |
Location: |
Chr.21:46229231-46251701 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MCM3AP-AS1 | NR_002776.4 | |||
NR_110565.1 | ||||
AF426263.1 | ||||
AK001370.1 | ||||
BC059792.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv519904 | Chr.21:46163592 - 46461396 on Build GRCh38 | Loss | DIP2A PCNT LSS YBEY MCM3AP-AS1 C21orf58 MCM3AP SPATC1L |
nsv470910 | Chr.21:45933861 - 46665076 on Build GRCh38 | Gain | S100B LOC101928796 PCNT YBEY MCM3AP-AS1 FTCD DIP2A-IT1 SPATC1L DIP2A COL6A1 LSS PRMT2 C21orf58 MCM3AP COL6A2 PCBP3 |
nsv587975 | Chr.21:46241321 - 46410929 on Build GRCh38 | Gain | PCNT YBEY MCM3AP-AS1 C21orf58 MCM3AP |
nsv1060978 | Chr.21:46068159 - 46413726 on Build GRCh38 | Gain | PCNT LSS YBEY MCM3AP-AS1 C21orf58 FTCD MCM3AP COL6A2 SPATC1L |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |