Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 15 - Intron 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
AK057774.1 | BAB71566.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | LOC143666 IFITM5 CDHR5 IRF7 HRAS IFITM3 LMNTD2 PKP3 IFITM2 IFITM1 MIR210HG LOC101059906 PHRF1 ANO9 PTDSS2 SIGIRR B4GALNT4 LRRC56 RASSF7 RNH1 MIR210 PGGHG |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | PKP3 ANO9 SIGIRR B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | PKP3 ANO9 SIGIRR B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | PKP3 ANO9 PTDSS2 SIGIRR B4GALNT4 RNH1 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM5 NLRP6 RIC8A PSMD13 BET1L IFITM3 MIR6743 PKP3 IFITM2 SIRT3 IFITM1 ANO9 ODF3 PTDSS2 SIGIRR B4GALNT4 PGGHG |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | PKP3 ANO9 PTDSS2 SIGIRR B4GALNT4 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | LOC143666 CEND1 SLC25A22 TALDO1 TSPAN4 CD151 LOC171391 HRAS TMEM80 PDDC1 POLR2L SNORA52 MIR210HG LOC101059906 PHRF1 ANO9 PANO1 SCT MIR210 CDHR5 EPS8L2 CRACR2B PNPLA2 RPLP2 IRF7 DEAF1 CHID1 LMNTD2 AP2A2 PKP3 PIDD1 DRD4 PTDSS2 SIGIRR B4GALNT4 LRRC56 RASSF7 RNH1 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |