Assay Details
Target Gene Details
Entrez Gene ID: | 102546294 |
Gene Name: | uncharacterized LOC102546294 |
Gene Aliases: |
- |
Location: |
Chr.5:148268307-148383850 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC102546294 | NR_105057.1 | |||
AK054753.1 | ||||
DA523579.1 |
Target Gene Details
Entrez Gene ID: | 643394 |
Gene Name: | serine peptidase inhibitor, Kazal type 9 |
Gene Aliases: |
LEKTI2 |
Location: |
Chr.5:148323219-148341974 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPINK9 | NM_001040433.1 | NP_001035523.1 | ||
XM_017009709.1 | XP_016865198.1 | |||
AY396740.1 | AAR91618.1 | |||
BC137530.1 | ||||
BC137531.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3607102 | Chr.5:148026584 - 148359140 on Build GRCh38 | Loss | SPINK13 LOC105378220 SPINK9 SPINK5 SPINK14 SPINK6 LOC102546294 SPINK7 |
nsv5058 | Chr.5:148313602 - 148346355 on Build GRCh38 | Insertion | SPINK9 LOC102546294 SPINK7 |
esv3607107 | Chr.5:148224310 - 148363295 on Build GRCh38 | Gain | SPINK13 LOC105378220 SPINK9 LOC102546294 SPINK7 |
nsv599945 | Chr.5:148269618 - 148340924 on Build GRCh38 | Loss | SPINK13 SPINK9 LOC102546294 SPINK7 |
More Information
Additional Information:
For this assay, SNP(s) [rs79512421] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |