Assay Details
Target Gene Details
Entrez Gene ID: | 8140 |
Gene Name: | solute carrier family 7 member 5 |
Gene Aliases: |
4F2LC, CD98, D16S469E, E16, LAT1, MPE16, hLAT1 |
Location: |
Chr.16:87830022-87869499 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC7A5 | NM_003486.5 | 10 | 2633 | NP_003477.4 |
XM_006721286.3 | 10 | 2276 | XP_006721349.2 | |
AB018009.1 | 10 | 2626 | BAA84648.1 | |
AF104032.1 | 10 | 2627 | AAD20464.1 | |
BC039692.2 | 10 | 2658 | AAH39692.1 | |
BC042600.1 | 10 | 2627 | AAH42600.1 | |
M80244.1 | 10 | 2073 | AAA35780.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1059786 | Chr.16:87811419 - 88019505 on Build GRCh38 | Gain | CA5A MIR6775 SLC7A5 BANP LOC107987237 |
nsv833322 | Chr.16:87715029 - 87884870 on Build GRCh38 | Loss | MIR6775 KLHDC4 SLC7A5 LOC102724467 LOC107987237 |
nsv1160441 | Chr.16:87761248 - 87867260 on Build GRCh38 | Deletion | MIR6775 KLHDC4 SLC7A5 LOC102724467 LOC107987237 |
esv3892935 | Chr.16:87808912 - 88010269 on Build GRCh38 | Loss | CA5A MIR6775 SLC7A5 BANP LOC107987237 |
nsv573557 | Chr.16:87808535 - 87854711 on Build GRCh38 | Loss | MIR6775 SLC7A5 |
dgv3062n100 | Chr.16:87725235 - 87842257 on Build GRCh38 | Loss | MIR6775 KLHDC4 SLC7A5 LOC102724467 |
dgv36n68 | Chr.16:87801736 - 87983550 on Build GRCh38 | Loss | CA5A MIR6775 SLC7A5 BANP LOC107987237 |
nsv1062946 | Chr.16:87635801 - 88019505 on Build GRCh38 | Gain | CA5A MIR6775 KLHDC4 SLC7A5 LOC102724467 LOC100129215 JPH3 BANP LOC105371397 LOC107987237 |
nsv457616 | Chr.16:87705252 - 87914409 on Build GRCh38 | Gain | CA5A MIR6775 KLHDC4 SLC7A5 LOC102724467 LOC107987237 |
More Information
Additional Information:
For this assay, SNP(s) [rs150027728] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |