Assay Details
Target Gene Details
Entrez Gene ID: | 146712 |
Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 |
Gene Aliases: |
3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1 |
Location: |
Chr.17:82942149-83051845 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B3GNTL1 | NM_001009905.2 | 13 | 1191 | NP_001009905.1 |
NM_001320742.1 | 14 | 1309 | NP_001307671.1 | |
NM_001320743.1 | 9 | 1786 | NP_001307672.1 | |
NR_135465.1 | 14 | 1546 | ||
NR_135466.1 | 9 | 1777 | ||
XM_006722272.3 | 13 | 1251 | XP_006722335.1 | |
XM_011523532.2 | 12 | 1159 | XP_011521834.1 | |
XM_011523535.1 | 10 | 2128 | XP_011521837.1 | |
XM_017024205.1 | 12 | 1129 | XP_016879694.1 | |
XM_017024206.1 | 10 | 912 | XP_016879695.1 | |
AK054757.1 | 9 | 1777 | ||
AK126018.1 | 2 | 3137 | ||
AY304503.1 | 13 | 1189 | AAQ74775.1 | |
AY634364.1 | 13 | 1191 | AAT47555.1 | |
BC019623.1 | 11 | 985 | AAH19623.1 | |
U79265.1 | 2 | 1557 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1067553 | Chr.17:82530808 - 83091923 on Build GRCh38 | Loss | METRNL MIR4525 TBCD RAB40B ZNF750 FN3KRP LOC105371944 FN3K LOC101929552 B3GNTL1 WDR45B LOC105376791 FOXK2 |
dgv3296n100 | Chr.17:82851564 - 83091923 on Build GRCh38 | Gain | LOC105371944 METRNL B3GNTL1 TBCD |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | SLC38A10 TEX19 OXLD1 ARHGDIA MIR4525 MIR6787 TMEM105 LOC101929511 MIR6786 LOC105376790 BAHCC1 LRRC45 TSPAN10 LINC00482 CCDC57 WDR45B LOC100130370 PPP1R27 STRA13 LOC105371925 OGFOD3 RAC3 MIR3186 MAFG-AS1 FAAP100 ZNF750 GCGR ACTG1 MYADML2 MCRIP1 RFNG PCYT2 TEPSIN SLC16A3 SECTM1 MAFG SIRT7 FASN MIR4740 CD7 FOXK2 HEXDC NPB C17orf89 SNORD134 C17orf62 UTS2R CEP131 ANAPC11 TBCD P4HB NARF ASPSCR1 CSNK1D ARL16 NPLOC4 LOC105371944 FN3K HGS MRPL12 SLC25A10 GPS1 CCDC137 FSCN2 DUS1L AATK-AS1 RAB40B DCXR ALYREF FN3KRP AATK LOC101929552 PYCR1 B3GNTL1 LOC105376791 PDE6G NOTUM |
nsv576217 | Chr.17:82937869 - 82960820 on Build GRCh38 | Loss | LOC105371944 B3GNTL1 TBCD |
dgv3297n100 | Chr.17:82879855 - 83048753 on Build GRCh38 | Gain | LOC105371944 B3GNTL1 TBCD |
esv3893052 | Chr.17:82895301 - 83102003 on Build GRCh38 | Gain | LOC105371944 METRNL B3GNTL1 TBCD |
nsv1057153 | Chr.17:82876571 - 83091923 on Build GRCh38 | Loss | LOC105371944 METRNL B3GNTL1 TBCD |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | TEX19 ARHGDIA MIR4525 MIR6787 LOC101929511 LOC105376790 LRRC45 CCDC57 WDR45B PPP1R27 STRA13 OGFOD3 RAC3 MAFG-AS1 ZNF750 MYADML2 MCRIP1 RFNG PCYT2 SLC16A3 SECTM1 MAFG SIRT7 FASN CD7 FOXK2 HEXDC NPB SNORD134 C17orf62 UTS2R ANAPC11 TBCD P4HB NARF ASPSCR1 CSNK1D LOC105371944 FN3K GPS1 DUS1L METRNL RAB40B DCXR ALYREF FN3KRP LOC101929552 PYCR1 B3GNTL1 LOC105376791 NOTUM |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |