Assay Details
Target Gene Details
Entrez Gene ID: | 26121 |
Gene Name: | pre-mRNA processing factor 31 |
Gene Aliases: |
NY-BR-99, PRP31, RP11, SNRNP61 |
Location: |
Chr.19:54115410-54131719 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 8 - Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRPF31 | NM_015629.3 | NP_056444.3 | ||
XM_006723137.3 | XP_006723200.1 | |||
AB593024.1 | ||||
AB593025.1 | ||||
AF308303.1 | AAG48270.1 | |||
AK098547.1 | BAC05329.1 | |||
AK301709.1 | ||||
AL050369.1 | CAB43677.1 | |||
AY040822.1 | AAK77986.1 | |||
BC117389.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion | TFPT NDUFA3 PRPF31 OSCAR TARM1 VSTM1 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | TFPT CNOT3 NDUFA3 PRPF31 MBOAT7 LENG1 TMC4 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | TSEN34 TFPT CNOT3 NDUFA3 PRPF31 OSCAR MBOAT7 LENG1 TMC4 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | TSEN34 CNOT3 MIR1283-1 NDUFA3 LOC105372457 OSCAR LILRA6 MIR520B MIR519E LILRB5 MIR517C MIR526A2 MIR519A2 ZNF665 MIR523 MIR519C MIR521-1 MIR518E BIRC8 MIR517A MIR371B MIR371A MIR525 MIR518B MIR372 TFPT MIR526A1 LILRB3 MIR519D MIR516A1 MBOAT7 MIR524 LILRB2 MIR517B MYADM ZNF331 MIR518F MIR520G MIR518A2 MIR512-1 TPM3P9 MIR520H MIR526B VN1R2 MIR515-2 DPRX VSTM1 NLRP12 MIR520C MIR520D MIR520E MIR512-2 MIR519B MIR935 MIR516B2 ZNF813 MIR518C MIR373 MIR520A ZNF525 CACNG8 LILRA5 MIR1283-2 MIR4752 FAM90A27P CACNG6 MIR516A2 MIR498 PRPF31 MIR1323 ZNF765 MIR515-1 MIR520F TARM1 MIR527 MIR518D MIR518A1 TMC4 ZNF761 ZNF845 MIR516B1 MIR521-2 RPS9 ZNF818P MIR519A1 LENG1 ZNF677 LOC284379 PRKCG MIR522 CACNG7 VN1R4 |
nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss | TFPT NDUFA3 PRPF31 OSCAR TARM1 |
nsv2545 | Chr.19:54122949 - 54142607 on Build GRCh38 | Insertion | CNOT3 PRPF31 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |