Assay Details
Target Gene Details
Entrez Gene ID: | 26121 |
Gene Name: | pre-mRNA processing factor 31 |
Gene Aliases: |
NY-BR-99, PRP31, RP11, SNRNP61 |
Location: |
Chr.19:54115410-54131719 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRPF31 | NM_015629.3 | NP_056444.3 | ||
XM_006723137.3 | XP_006723200.1 | |||
AB593024.1 | ||||
AB593025.1 | ||||
AF308303.1 | AAG48270.1 | |||
AK098547.1 | BAC05329.1 | |||
AK301709.1 | ||||
AL050369.1 | CAB43677.1 | |||
AY040822.1 | AAK77986.1 | |||
BC117389.1 | ||||
CN306666.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv2543 | Chr.19:54118610 - 54120907 on Build GRCh38 | Insertion | PRPF31 |
nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion | TFPT VSTM1 NDUFA3 OSCAR TARM1 PRPF31 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | LENG1 TFPT MBOAT7 NDUFA3 TMC4 CNOT3 PRPF31 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | LENG1 TFPT TSEN34 MBOAT7 NDUFA3 TMC4 OSCAR CNOT3 PRPF31 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | MIR519A1 MIR518F LILRA6 ZNF818P ZNF813 OSCAR LILRB3 DPRX MIR520C MIR517B MIR516A2 LILRB2 MIR1323 MIR520H MIR515-1 MIR519E MIR517C TMC4 MIR518B BIRC8 CNOT3 MIR371A MIR520G MIR520E LOC284379 MIR518C MIR527 MIR518E TSEN34 MIR516B2 MBOAT7 NDUFA3 ZNF331 CACNG8 MIR516A1 MIR521-1 MIR517A FAM90A27P MIR518A2 MIR373 MIR520A MIR519B TPM3P9 MIR522 MIR520D MIR1283-1 MIR518D MIR512-2 LOC105372457 ZNF761 MIR512-1 CACNG6 MIR1283-2 NLRP12 VN1R2 MIR521-2 MIR526B MYADM TARM1 RPS9 MIR519A2 MIR519D MIR519C LILRA5 MIR524 VN1R4 PRKCG MIR515-2 PRPF31 MIR371B MIR520B MIR520F VSTM1 MIR498 MIR372 LILRB5 ZNF665 MIR4752 ZNF525 ZNF677 MIR525 MIR526A1 ZNF765 LENG1 TFPT MIR518A1 MIR526A2 ZNF845 CACNG7 MIR935 MIR523 MIR516B1 |
nsv470157 | Chr.19:54063999 - 54127773 on Build GRCh38 | Loss | TFPT NDUFA3 OSCAR TARM1 PRPF31 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |