Assay Details
Target Gene Details
Entrez Gene ID: | 124565 |
Gene Name: | solute carrier family 38 member 10 |
Gene Aliases: |
PP1744 |
Location: |
Chr.17:81244811-81295433 on Build GRCh38 |
Assay Gene Location: | Within Exon 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A10 | NM_001037984.2 | 16 | 4284 | NP_001033073.1 |
XM_005257019.1 | 17 | 4402 | XP_005257076.1 | |
XM_011524288.1 | 17 | 4423 | XP_011522590.1 | |
XM_011524289.1 | 16 | 4399 | XP_011522591.1 | |
XM_011524290.1 | 15 | 3678 | XP_011522592.1 | |
AF086389.1 | 1 | 386 | ||
AI476273.1 | 1 | 63 | ||
BM129331.1 | 1 | 242 | ||
CA447446.1 | 1 | 257 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv2161 | Chr.17:81238081 - 81282084 on Build GRCh38 | Insertion | TEPSIN SLC38A10 C17orf89 |
esv26223 | Chr.17:80659041 - 81736487 on Build GRCh38 | Gain+Loss | PDE6G MRPL12 BAHCC1 AATK-AS1 C17orf89 SLC25A10 TMEM105 CCDC137 MIR3186 MIR6786 LOC101928855 TSPAN10 SLC38A10 MIR3065 LOC400627 OXLD1 LOC107985021 MIR657 MIR338 TEPSIN BAIAP2 MIR4740 LOC100129503 ARL16 FAAP100 AATK HGS LINC00482 CHMP6 CEP131 FSCN2 LOC100130370 RPTOR ACTG1 LOC107985022 BAIAP2-AS1 LOC105371921 MIR1250 LOC105371925 NPLOC4 |
esv3893051 | Chr.17:81244320 - 81272804 on Build GRCh38 | Gain | SLC38A10 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | LOC105376790 PDE6G MRPL12 LOC101929552 MCRIP1 C17orf89 MAFG-AS1 SLC25A10 TEX19 TMEM105 ZNF750 PPP1R27 FOXK2 ANAPC11 ALYREF MIR3186 P4HB MIR6786 MIR6787 PCYT2 TSPAN10 SLC38A10 MYADML2 LOC105376791 GPS1 ARHGDIA SLC16A3 MIR4740 STRA13 LRRC45 ARL16 FAAP100 AATK HGS MIR4525 LINC00482 DUS1L OGFOD3 SIRT7 CEP131 FSCN2 ACTG1 FN3K LOC105371925 C17orf62 CCDC57 DCXR NPB TBCD BAHCC1 HEXDC AATK-AS1 CCDC137 FN3KRP SNORD134 RAB40B ASPSCR1 UTS2R OXLD1 CSNK1D LOC105371944 RAC3 MAFG RFNG TEPSIN NARF GCGR LOC101929511 NOTUM CD7 SECTM1 FASN PYCR1 LOC100130370 B3GNTL1 WDR45B NPLOC4 |
dgv46n68 | Chr.17:81133921 - 81288932 on Build GRCh38 | Loss | TEPSIN CEP131 SLC38A10 AATK-AS1 C17orf89 AATK LOC105371925 |
nsv457971 | Chr.17:81216762 - 81282974 on Build GRCh38 | Loss | TEPSIN CEP131 SLC38A10 C17orf89 LOC105371925 |
nsv470619 | Chr.17:81032233 - 81349843 on Build GRCh38 | Loss | TEPSIN BAIAP2 AATK-AS1 C17orf89 TMEM105 AATK LINC00482 CEP131 SLC38A10 MIR3065 BAIAP2-AS1 MIR1250 LOC105371925 MIR657 MIR338 |
nsv1160499 | Chr.17:81235307 - 81320655 on Build GRCh38 | Deletion | TEPSIN SLC38A10 C17orf89 TMEM105 LINC00482 |
nsv1064123 | Chr.17:81168449 - 81282457 on Build GRCh38 | Gain | TEPSIN CEP131 SLC38A10 AATK-AS1 C17orf89 LOC105371925 |
nsv952389 | Chr.17:81137501 - 81593774 on Build GRCh38 | Deletion | TEPSIN MIR4740 BAHCC1 AATK-AS1 C17orf89 FAAP100 TMEM105 AATK LINC00482 MIR3186 CEP131 FSCN2 LOC100130370 ACTG1 SLC38A10 LOC105371925 NPLOC4 |
nsv509677 | Chr.17:81227139 - 81267309 on Build GRCh38 | Insertion | TEPSIN SLC38A10 C17orf89 LOC105371925 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |