Assay Details
Target Gene Details
Entrez Gene ID: | 92162 |
Gene Name: | transmembrane protein 88 |
Gene Aliases: |
- |
Location: |
Chr.17:7854886-7856099 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TMEM88 | NM_001319941.1 | 2 | 367 | NP_001306870.1 |
NM_203411.1 | 2 | 693 | NP_981956.1 | |
XM_005256856.3 | 2 | 915 | XP_005256913.1 | |
AK000032.1 | 2 | 694 | ||
BC057812.1 | 2 | 693 | AAH57812.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv510n67 | Chr.17:7852429 - 7911448 on Build GRCh38 | Gain | TMEM88 KDM6B CYB5D1 NAA38 SCARNA21 CHD3 |
nsv833351 | Chr.17:7755691 - 7893863 on Build GRCh38 | Loss | TMEM88 DNAH2 KDM6B CYB5D1 NAA38 CHD3 |
nsv1070804 | Chr.17:7853581 - 7856982 on Build GRCh38 | Deletion | TMEM88 KDM6B NAA38 |
More Information
Additional Information:
For this assay, SNP(s) [rs144306051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |