Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | MCPH1-AS1 MIR4659A DEFA4 MIR8055 ANGPT2 DEFA6 MCPH1 DEFA8P XKR5 AGPAT5 MIR4659B GS1-24F4.2 DEFB1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MCPH1 XKR5 MCPH1-AS1 AGPAT5 MIR4659A MIR4659B MIR8055 GS1-24F4.2 DEFB1 ANGPT2 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MCPH1 XKR5 MCPH1-AS1 AGPAT5 MIR4659A MIR4659B MIR8055 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MCPH1 XKR5 MCPH1-AS1 AGPAT5 MIR4659A MIR4659B MIR8055 GS1-24F4.2 DEFB1 ANGPT2 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | XKR5 MCPH1-AS1 AGPAT5 MIR4659A MIR4659B GS1-24F4.2 DEFB1 |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA11P DEFT1P DEFA9P MIR4659A DEFA3 DEFA4 DEFA7P DEFT1P2 DEFA6 DEFA8P XKR5 DEFA5 DEFA10P AGPAT5 DEFA1 DEFA1B MIR4659B GS1-24F4.2 DEFB1 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFB103B USP17L3 ZNF705G FAM90A10P DEFA3 LOC101928095 LOC107986910 DEFA6 USP17L8 DEFB105A DEFB106B DEFB109P1B DEFB105B MIR4659B DEFB4A FAM66B DEFA7P LINC00965 ZNF705B DEFB104A LOC101929400 AGPAT5 DEFB107B DEFA1 DEFB104B GS1-24F4.2 DEFB1 DEFB106A DEFA11P DEFT1P DEFA9P OR7E125P MIR4659A DEFB103A DEFB4B FAM90A7P DEFT1P2 DEFA8P XKR5 PRR23D1 USP17L1 DEFA10P DEFB107A DEFA1B OR7E154P DEFB108P1 SPAG11B SPAG11A DEFA4 FAM66E DEFA5 USP17L4 PRR23D2 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | XKR5 MCPH1-AS1 AGPAT5 MIR4659A MIR4659B |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |