Assay Details
Target Gene Details
Entrez Gene ID: | 2583 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 1 |
Gene Aliases: |
GALGT, GALNACT, GalNAc-T, SPG26 |
Location: |
Chr.12:57623409-57633239 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT1 | XM_005268773.4 | 11 | 3889 | XP_005268830.1 |
XM_011538147.2 | 12 | 3907 | XP_011536449.1 | |
XM_011538148.2 | 12 | 3874 | XP_011536450.1 | |
XM_017019140.1 | 11 | 3991 | XP_016874629.1 | |
XM_017019141.1 | 11 | 3703 | XP_016874630.1 | |
XM_017019142.1 | 11 | 3568 | XP_016874631.1 | |
AB209460.1 | 10 | 4071 | BAD92697.1 |
Target Gene Details
Entrez Gene ID: | 65012 |
Gene Name: | solute carrier family 26 member 10 |
Gene Aliases: |
- |
Location: |
Chr.12:57619910-57626151 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 10 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC26A10 | NM_133489.2 | NP_597996.2 | ||
AF331523.1 | AAM92901.1 | |||
AK122981.1 | BAC85515.1 | |||
AK314085.1 | ||||
AL050358.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv482992 | Chr.12:56206217 - 57706217 on Build GRCh38 | Gain+Loss | RBMS2 SDR9C7 OS9 ARHGAP9 MIR6758 R3HDM2 IL23A NDUFA4L2 DDIT3 GLS2 NACA DCTN2 DTX3 PAN2 SPRYD4 TIMELESS STAC3 PTGES3 HSD17B6 MBD6 LRP1 MARS APOF SHMT2 MIR1228 MIR616 PRIM1 SNORA105C GPR182 RNF41 SLC26A10 INHBE MYO1A BAZ2A ANKRD52 LRP1-AS SLC39A5 PIP4K2C NABP2 ARHGEF25 NXPH4 HBCBP SNORD59B LOC101927583 NEMP1 ATP5B STAT6 CNPY2 COQ10A ZBTB39 TAC3 SNORD59A NAB2 INHBC B4GALNT1 KIF5A MIP CS GLI1 STAT2 RDH16 |
More Information
Set Membership: |
Intragenic Exonic Non-exonic DGV Variation |