Assay Details
Target Gene Details
Entrez Gene ID: | 144108 |
Gene Name: | SPT2 chromatin protein domain containing 1 |
Gene Aliases: |
Spt2 |
Location: |
Chr.11:18606401-18634823 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPTY2D1 | NM_194285.2 | 6 | 3287 | NP_919261.2 |
XM_011519919.2 | 6 | 3145 | XP_011518221.1 | |
AK096694.1 | 2 | 1191 | ||
AL834393.1 | 3 | 1337 | CAD39055.1 | |
BC056261.1 | AAH56261.1 | |||
BX538046.1 | 4 | 1666 | CAD97985.1 | |
BX641102.1 | 6 | 3188 | CAE46047.1 | |
BX647798.1 | 6 | 3287 | ||
BX648114.1 | 4 | 2866 | CAH10772.1 | |
BX648478.1 | 6 | 3209 | ||
CR749626.1 | 4 | 2730 | CAH18420.1 |
Target Gene Details
Entrez Gene ID: | 100506540 |
Gene Name: | SPTY2D1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.11:18599804-18610255 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SPTY2D1-AS1 | NR_038360.1 | |||
AK097654.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv553633 | Chr.11:18290154 - 19036904 on Build GRCh38 | Gain | TMEM86A SPTY2D1 MIR3159 LDHA HPS5 LDHAL6A PTPN5 UEVLD IGSF22 TSG101 GTF2H1 MRGPRX1 SPTY2D1-AS1 LDHC |
nsv516413 | Chr.11:18606871 - 18622211 on Build GRCh38 | Loss | SPTY2D1 SPTY2D1-AS1 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |