Assay Details
Target Gene Details
Entrez Gene ID: | 6891 |
Gene Name: | transporter 2, ATP binding cassette subfamily B member |
Gene Aliases: |
ABC18, ABCB3, APT2, D6S217E, PSF-2, PSF2, RING11 |
Location: |
Chr.6:32821833-32838823 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TAP2 | NM_018833.2 | 12 | 2282 | NP_061313.2 |
AF105151.1 | 12 | 2239 | AAD12059.1 | |
AF152583.1 | 1 | 180 | AAD32715.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1073969 | Chr.6:31456422 - 33480523 on Build GRCh38 | Deletion | LY6G6D LY6G5B MIR4646 HLA-DQB1-AS1 NCR3 HSPA1L SYNGAP1 C6orf25 LY6G6E HSPA1B RING1 PSMB8-AS1 LOC100287329 HLA-DQA2 MIR3135B ZBTB22 HCG23 ZBTB9 NOTCH4 HLA-DPA1 PFDN6 HCP5 DXO SLC44A4 PSMB8 HLA-DMA HCG26 LST1 TAPBP BTNL2 PSMB9 EGFL8 CFB PHF1 MIR6834 AGER COL11A2 ZBTB12 ABHD16A ATF6B PRRT1 MIR6832 HLA-DRB1 LTB CYP21A1P PRRC2A PPT2 HLA-DPB2 C2 SAPCD1-AS1 HCG25 PBX2 HLA-DPB1 MIR6833 HCG24 LSM2 RNF5 FKBPL C2-AS1 MIR5004 CLIC1 HSD17B8 DDAH2 LOC100507547 SNORD84 SAPCD1 B3GALT4 HLA-DRA AGPAT1 HLA-DRB5 SLC39A7 BRD2 VPS52 WDR46 TNF PPT2-EGFL8 GPANK1 CYP21A2 RXRB C4B SNORD48 TAP1 HLA-DQA1 SNORD117 HSPA1A C6orf47 LOC100294145 VARS DDX39B-AS1 MIR219A1 EHMT2 LY6G6F C6orf48 HLA-DQB1 ATP6V1G2-DDX39B MCCD1 MSH5 VWA7 HLA-DMB CSNK2B AIF1 HLA-DQB2 DDX39B MICB NFKBIL1 LTA MSH5-SAPCD1 RPS18 CUTA LOC102725068 MIR6721 APOM TNXA TAP2 LY6G6C C6orf10 SKIV2L NELFE BAG6 TNXB PPP1R2P1 STK19 C4A LOC101929163 KIFC1 HLA-DOB GPSM3 HLA-DRB6 DAXX LY6G5C ATP6V1G2 MIR1236 NEU1 MIR6873 RGL2 HLA-DOA SNORA38 SNORD52 |
nsv1112900 | Chr.6:31455323 - 33480423 on Build GRCh38 | Deletion | LY6G6D LY6G5B MIR4646 HLA-DQB1-AS1 NCR3 HSPA1L SYNGAP1 C6orf25 LY6G6E HSPA1B RING1 PSMB8-AS1 LOC100287329 HLA-DQA2 MIR3135B ZBTB22 HCG23 ZBTB9 NOTCH4 HLA-DPA1 PFDN6 HCP5 DXO SLC44A4 PSMB8 HLA-DMA HCG26 LST1 TAPBP BTNL2 PSMB9 EGFL8 CFB PHF1 MIR6834 AGER COL11A2 ZBTB12 ABHD16A ATF6B PRRT1 MIR6832 HLA-DRB1 LTB CYP21A1P PRRC2A PPT2 HLA-DPB2 C2 SAPCD1-AS1 HCG25 PBX2 HLA-DPB1 MIR6833 HCG24 LSM2 RNF5 FKBPL C2-AS1 MIR5004 CLIC1 HSD17B8 DDAH2 LOC100507547 SNORD84 SAPCD1 B3GALT4 HLA-DRA AGPAT1 HLA-DRB5 SLC39A7 BRD2 VPS52 WDR46 TNF PPT2-EGFL8 GPANK1 CYP21A2 RXRB C4B SNORD48 TAP1 HLA-DQA1 SNORD117 HSPA1A C6orf47 LOC100294145 VARS DDX39B-AS1 MIR219A1 EHMT2 LY6G6F C6orf48 HLA-DQB1 ATP6V1G2-DDX39B MCCD1 MSH5 VWA7 HLA-DMB CSNK2B AIF1 HLA-DQB2 DDX39B MICB NFKBIL1 LTA MSH5-SAPCD1 RPS18 CUTA LOC102725068 MIR6721 APOM TNXA TAP2 LY6G6C C6orf10 SKIV2L NELFE BAG6 TNXB PPP1R2P1 STK19 C4A LOC101929163 KIFC1 HLA-DOB GPSM3 HLA-DRB6 DAXX LY6G5C ATP6V1G2 MIR1236 NEU1 MIR6873 RGL2 HLA-DOA SNORA38 SNORD52 |
nsv1119076 | Chr.6:32595823 - 33480623 on Build GRCh38 | Deletion | RXRB COL11A2 RPS18 CUTA HLA-DQB1-AS1 SYNGAP1 TAP1 TAP2 HLA-DQA1 RING1 PSMB8-AS1 HLA-DPB2 HLA-DQA2 MIR3135B ZBTB22 PPP1R2P1 HCG25 ZBTB9 HLA-DPB1 LOC100294145 HCG24 MIR219A1 HLA-DPA1 HLA-DQB1 MIR5004 PFDN6 KIFC1 HLA-DOB DAXX PSMB8 HSD17B8 HLA-DMA TAPBP HLA-DMB B3GALT4 HLA-DQB2 SLC39A7 BRD2 PSMB9 MIR6873 VPS52 RGL2 HLA-DOA WDR46 PHF1 MIR6834 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |