Assay Details
Target Gene Details
Entrez Gene ID: | 126133 |
Gene Name: | aldehyde dehydrogenase 16 family member A1 |
Gene Aliases: |
- |
Location: |
Chr.19:49453216-49471050 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 10 - Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ALDH16A1 | NM_001145396.1 | NP_001138868.1 | ||
NM_153329.3 | NP_699160.2 | |||
XM_011526441.1 | XP_011524743.1 | |||
XM_011526442.1 | XP_011524744.1 | |||
AK074136.1 | BAB84962.1 | |||
AK297101.1 | ||||
AK298587.1 | ||||
AK301246.1 | ||||
AY007096.1 | ||||
BC014895.2 | AAH14895.2 | |||
BC042142.1 | AAH42142.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv2518 | Chr.19:49452273 - 49465137 on Build GRCh38 | Insertion | ALDH16A1 PIH1D1 |
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | RASIP1 SEC1P GRWD1 ATF5 LHB TULP2 BCL2L12 SIGLEC16 CGB5 SNAR-D RUVBL2 CPT1C SNRNP70 FUZ MIR4750 SNAR-A5 PPP1R15A SNAR-A12 FGF21 MIR4324 SNAR-B2 DHDH PIH1D1 CA11 SIGLEC11 SNAR-A4 TMEM143 NOSIP SULT2B1 PLEKHA4 LOC105372430 KDELR1 TSKS PTOV1-AS1 FLJ26850 MIR6799 PTOV1-AS2 PTH2 SNORD33 LOC105447645 SNAR-A8 SNAR-A6 VRK3 LOC101059948 GFY TRPM4 SNAR-C2 ZNF473 SNORD34 RCN3 FUT1 KCNA7 CGB7 FUT2 TBC1D17 ALDH16A1 DBP SNAR-C3 PLA2G4C-AS1 DKKL1 RPL18 BCAT2 MAMSTR MIR6798 SCAF1 BAX SNAR-C5 LIN7B IL4I1 PRMT1 NUCB1-AS1 SYNGR4 SNORD35B HRC SNAR-A9 PPFIA3 SNAR-A1 CCDC114 IRF3 PRRG2 MED25 MIR4749 SNAR-G2 CARD8-AS1 BSPH1 PNKP RRAS FTL SNAR-A10 ZNF114 CABP5 PRR12 SPACA4 CGB3 CCDC155 MIR4751 ELSPBP1 NTF4 KCNJ14 CGB1 SNORD35A SNAR-A2 FAM83E PLA2G4C LOC100287477 CGB8 RPL13A FCGRT SNAR-A3 RPS11 SNAR-B1 SNAR-A13 CD37 FLT3LG PTOV1 SLC17A7 SNAR-A7 C19orf68 C19orf73 MIR5088 EMP3 GRIN2D NUP62 CGB2 MIR150 HSD17B14 LMTK3 ADM5 NUCB1 SNAR-C1 NTN5 AKT1S1 CARD8 LOC101928295 SNAR-A14 SNAR-A11 CYTH2 TEAD2 IZUMO1 GYS1 SNAR-G1 LIG1 MIR6800 SNAR-C4 SNORD32A SPHK2 SLC6A16 AP2A1 |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD35B MIR150 ALDH16A1 RPL13A SNORD33 FCGRT PIH1D1 RPS11 NOSIP FLT3LG SNORD32A SNORD34 RCN3 SNORD35A |
esv3644624 | Chr.19:49461676 - 49475440 on Build GRCh38 | Gain | FLT3LG ALDH16A1 |
nsv953599 | Chr.19:49386444 - 49506743 on Build GRCh38 | Deletion | SNORD35B MIR150 ALDH16A1 PTH2 RPL13A SNORD33 PIH1D1 RPS11 LOC101928295 FLT3LG CCDC155 GFY SLC17A7 SNORD32A SNORD34 SNORD35A |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |