Assay Details
Target Gene Details
Entrez Gene ID: | 146712 |
Gene Name: | UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 |
Gene Aliases: |
3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1 |
Location: |
Chr.17:82942149-83051845 on Build GRCh38 |
Assay Gene Location: | Within Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B3GNTL1 | NM_001009905.2 | NP_001009905.1 | ||
NM_001320742.1 | NP_001307671.1 | |||
NM_001320743.1 | NP_001307672.1 | |||
NR_135465.1 | 13 | 1354 | ||
NR_135466.1 | ||||
XM_006722272.3 | XP_006722335.1 | |||
XM_011523532.2 | XP_011521834.1 | |||
XM_011523535.1 | XP_011521837.1 | |||
XM_017024205.1 | XP_016879694.1 | |||
XM_017024206.1 | XP_016879695.1 | |||
AK054757.1 | ||||
AK126018.1 | 1 | 2945 | ||
AY304503.1 | AAQ74775.1 | |||
AY634364.1 | AAT47555.1 | |||
BC019623.1 | AAH19623.1 | |||
U79265.1 | 1 | 1365 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1067553 | Chr.17:82530808 - 83091923 on Build GRCh38 | Loss | RAB40B MIR4525 TBCD FOXK2 FN3K FN3KRP LOC105371944 LOC105376791 B3GNTL1 LOC101929552 ZNF750 METRNL WDR45B |
dgv3296n100 | Chr.17:82851564 - 83091923 on Build GRCh38 | Gain | LOC105371944 TBCD B3GNTL1 METRNL |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | DUS1L ACTG1 LRRC45 STRA13 ASPSCR1 MAFG-AS1 LOC105371925 OXLD1 MAFG C17orf89 LOC105376791 MIR6787 LOC101929552 CEP131 LOC105376790 SLC16A3 RFNG SLC38A10 TEPSIN BAHCC1 PYCR1 P4HB MIR6786 TSPAN10 NOTUM AATK FASN PCYT2 NPLOC4 RAC3 CCDC57 CCDC137 WDR45B NARF MCRIP1 MIR4740 SECTM1 TMEM105 DCXR HGS SLC25A10 CSNK1D UTS2R NPB OGFOD3 CD7 LOC105371944 FAAP100 MIR3186 ZNF750 HEXDC RAB40B LOC101929511 MIR4525 TBCD FOXK2 SNORD134 FN3K SIRT7 MRPL12 PDE6G FN3KRP AATK-AS1 GCGR ANAPC11 MYADML2 PPP1R27 ARHGDIA FSCN2 TEX19 ARL16 LOC100130370 B3GNTL1 C17orf62 GPS1 ALYREF LINC00482 |
nsv576217 | Chr.17:82937869 - 82960820 on Build GRCh38 | Loss | LOC105371944 TBCD B3GNTL1 |
nsv529032 | Chr.17:82946968 - 82963153 on Build GRCh38 | Loss | B3GNTL1 |
dgv3297n100 | Chr.17:82879855 - 83048753 on Build GRCh38 | Gain | LOC105371944 TBCD B3GNTL1 |
esv3893052 | Chr.17:82895301 - 83102003 on Build GRCh38 | Gain | LOC105371944 TBCD B3GNTL1 METRNL |
nsv1057153 | Chr.17:82876571 - 83091923 on Build GRCh38 | Loss | LOC105371944 TBCD B3GNTL1 METRNL |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | DUS1L LRRC45 STRA13 ASPSCR1 MAFG-AS1 MAFG LOC105376791 MIR6787 LOC101929552 LOC105376790 SLC16A3 RFNG PYCR1 P4HB NOTUM FASN PCYT2 RAC3 CCDC57 METRNL WDR45B NARF MCRIP1 SECTM1 DCXR CSNK1D UTS2R NPB OGFOD3 CD7 LOC105371944 ZNF750 HEXDC RAB40B LOC101929511 MIR4525 TBCD FOXK2 SNORD134 FN3K SIRT7 FN3KRP ANAPC11 MYADML2 PPP1R27 ARHGDIA TEX19 B3GNTL1 C17orf62 GPS1 ALYREF |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |