Assay Details
Target Gene Details
Entrez Gene ID: | 5019 |
Gene Name: | 3-oxoacid CoA-transferase 1 |
Gene Aliases: |
OXCT, SCOT |
Location: |
Chr.5:41730065-41870689 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OXCT1 | NM_000436.3 | 1 | 196 | NP_000427.1 |
XM_017009494.1 | 1 | 77 | XP_016864983.1 | |
BE244429.1 | ||||
U62961.1 | AAB07366.1 |
Target Gene Details
Entrez Gene ID: | 100874002 |
Gene Name: | OXCT1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.5:41870030-41872241 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
OXCT1-AS1 | NR_046635.1 | |||
DB470733.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv4811 | Chr.5:41844420 - 41887251 on Build GRCh38 | Deletion | OXCT1-AS1 OXCT1 |
nsv830273 | Chr.5:41867194 - 42065968 on Build GRCh38 | Gain | C5orf51 OXCT1-AS1 OXCT1 FBXO4 |
esv3604851 | Chr.5:41591779 - 41992753 on Build GRCh38 | Gain | C5orf51 OXCT1-AS1 OXCT1 FBXO4 |
nsv830271 | Chr.5:41716425 - 41895608 on Build GRCh38 | Loss | OXCT1-AS1 OXCT1 |
nsv830272 | Chr.5:41833263 - 41986065 on Build GRCh38 | Gain | C5orf51 OXCT1-AS1 OXCT1 FBXO4 |
dgv1096e214 | Chr.5:41866397 - 41966396 on Build GRCh38 | Gain | C5orf51 OXCT1-AS1 OXCT1 FBXO4 |
esv2762518 | Chr.5:41780108 - 41935011 on Build GRCh38 | Loss | C5orf51 OXCT1-AS1 OXCT1 FBXO4 |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |