Assay Details
Target Gene Details
Entrez Gene ID: | 162394 |
Gene Name: | schlafen family member 5 |
Gene Aliases: |
- |
Location: |
Chr.17:35243026-35273650 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLFN5 | NM_144975.3 | NP_659412.3 | ||
XM_005257934.3 | XP_005257991.1 | |||
AK054668.1 | BAB70788.1 | |||
AK303299.1 | ||||
AK303632.1 | ||||
BC125200.1 | ||||
BC125201.1 | ||||
BX647942.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422399 | Chr.17:35212221 - 35291582 on Build GRCh38 | Deletion | SLFN5 LOC105371932 |
esv3892998 | Chr.17:35106468 - 35295755 on Build GRCh38 | Loss | NLE1 RAD51L3-RFFL SLFN5 RAD51D FNDC8 LOC105371932 SLC35G3 UNC45B |
esv3892999 | Chr.17:35252863 - 35925533 on Build GRCh38 | Loss | GAS2L2 C17orf50 LRRC37A8P SLFN12L SLFN13 TAF15 LOC105371743 MMP28 HEATR9 SLFN12 SLFN14 SNORD7 AP2B1 RASL10B SLFN5 SLFN11 PEX12 RDM1 CCL5 LOC105371933 |
nsv574741 | Chr.17:35225256 - 35500115 on Build GRCh38 | Loss | SLFN5 SLFN11 SLFN12L SLFN13 LOC105371932 SLFN12 LOC105371933 |
More Information
Additional Information:
For this assay, SNP(s) [rs114554615] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |