Assay Details
Target Gene Details
Entrez Gene ID: | 6560 |
Gene Name: | solute carrier family 12 member 4 |
Gene Aliases: |
CTC-479C5.17, KCC1, hKCC1 |
Location: |
Chr.16:67943474-67968694 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 18 - Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC12A4 | NM_001145961.1 | NP_001139433.1 | ||
NM_001145962.1 | NP_001139434.1 | |||
NM_001145963.1 | NP_001139435.1 | |||
NM_001145964.1 | NP_001139436.1 | |||
NM_005072.4 | NP_005063.1 | |||
AF047338.1 | AAC32815.1 | |||
AF054505.1 | AAC39684.1 | |||
AF054506.1 | AAC39685.1 | |||
AK026911.1 | ||||
AK097808.1 | ||||
AK293906.1 | ||||
AK293956.1 | ||||
AK299042.1 | ||||
AK302790.1 | ||||
AK316415.1 | ||||
AY026038.1 | AAK01946.1 | |||
BC021193.2 | AAH21193.1 | |||
U55054.1 | AAC50563.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522852 | Chr.16:67153308 - 68071571 on Build GRCh38 | Gain | AGRP HSF4 CTRL MIR328 LOC105369155 ACD FBXL8 LOC100505942 EXOC3L1 DDX28 FHOD1 LOC107984813 KCTD19 SLC12A4 LRRC29 NRN1L PSKH1 LRRC36 PSMB10 NOL3 PARD6A DPEP2 SLC9A5 HSD11B2 ATP6V0D1 FAM65A DUS2 TMEM208 C16orf86 KIAA0895L LCAT TPPP3 ZDHHC1 ELMO3 RANBP10 THAP11 E2F4 CENPT CARMIL2 LOC100131303 PLEKHG4 ENKD1 GFOD2 EDC4 TRADD TSNAXIP1 NUTF2 CTCF DPEP3 |
nsv524363 | Chr.16:67136529 - 68071571 on Build GRCh38 | Loss | AGRP HSF4 CTRL C16orf70 MIR328 LOC105369155 ACD FBXL8 LOC100505942 EXOC3L1 DDX28 FHOD1 LOC107984813 KCTD19 SLC12A4 LRRC29 NRN1L PSKH1 LRRC36 PSMB10 NOL3 PARD6A DPEP2 SLC9A5 HSD11B2 ATP6V0D1 FAM65A DUS2 TMEM208 C16orf86 KIAA0895L LCAT TPPP3 ZDHHC1 ELMO3 RANBP10 THAP11 E2F4 CENPT CARMIL2 LOC100131303 PLEKHG4 ENKD1 GFOD2 EDC4 TRADD TSNAXIP1 NUTF2 B3GNT9 CTCF DPEP3 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |