Assay Details
Target Gene Details
Entrez Gene ID: | 60343 |
Gene Name: | family with sequence similarity 3 member A |
Gene Aliases: |
2.19, DLD, DXS560S, XAP-7 |
Location: |
Chr.X:154506159-154516249 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM3A | NM_001171132.2 | 1 | 191 | NP_001164603.1 |
NM_001171133.2 | 1 | 191 | NP_001164604.1 | |
NM_001171134.2 | 1 | 191 | NP_001164605.1 | |
NM_001282311.1 | 1 | 191 | NP_001269240.1 | |
NM_001282312.1 | 1 | 191 | NP_001269241.1 | |
NM_021806.3 | 1 | 191 | NP_068578.2 | |
XM_005274714.3 | 1 | 138 | XP_005274771.1 | |
XM_005274716.3 | 1 | 138 | XP_005274773.1 | |
XM_005277879.4 | 1 | 197 | XP_005277936.1 | |
XM_006724831.2 | 1 | 138 | XP_006724894.1 | |
XM_006724832.3 | 1 | 197 | XP_006724895.1 | |
XM_006724833.2 | 1 | 138 | XP_006724896.1 | |
XM_006724834.2 | 1 | 99 | XP_006724897.1 | |
XM_017029699.1 | 1 | 198 | XP_016885188.1 | |
XM_017029700.1 | 1 | 197 | XP_016885189.1 | |
XM_017029701.1 | 1 | 197 | XP_016885190.1 | |
AK024601.1 | 1 | 148 | ||
AK057945.1 | 1 | 65 | ||
AK294116.1 | 1 | 154 | ||
AK314682.1 | 1 | 109 | ||
AL539139.3 | 1 | 191 | ||
BC002934.1 | 1 | 95 | AAH02934.1 | |
BM457676.1 | 1 | 173 | ||
CX867071.1 | 1 | 109 | ||
X87193.1 | CAA60645.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv33784 | Chr.X:153962665 - 155699588 on Build GRCh38 | Gain+Loss | SPRY3 FAM50A HCFC1 CTAG1B SLC10A3 TMLHE-AS1 H2AFB1 MTCP1 FAM3A LAGE3 TAZ LOC105373386 CLIC2 F8A2 RAB39B F8A1 F8 FAM223A SNORA56 H2AFB2 OPN1LW CMC4 TMEM187 BRCC3 TEX28 MECP2 MIR1184-3 VBP1 SNORA36A SNORA70 UBL4A SMIM9 G6PD GDI1 H2AFB3 GAB3 MPP1 PLXNA3 MIR6858 MIR1184-2 EMD IRAK1 ATP6AP1 OPN1MW OPN1MW3 MIR1184-1 RPL10 FLNA CTAG2 TKTL1 TMLHE FAM223B IKBKG MIR718 OPN1MW2 LOC101927830 CH17-340M24.3 F8A3 DNASE1L1 LOC107987332 MIR3202-2 MIR3202-1 FUNDC2 DKC1 CTAG1A HCFC1-AS1 MIR664B |
nsv519042 | Chr.X:154082978 - 154601444 on Build GRCh38 | Gain | G6PD GDI1 FAM50A PLXNA3 MIR6858 SLC10A3 EMD ATP6AP1 FAM3A LAGE3 TAZ OPN1MW LOC105373386 OPN1MW3 FAM223A RPL10 FLNA OPN1LW TKTL1 TEX28 MECP2 IKBKG OPN1MW2 CH17-340M24.3 DNASE1L1 LOC107987332 SNORA70 CTAG1A UBL4A |
esv33199 | Chr.X:153065734 - 154591978 on Build GRCh38 | Gain+Loss | ABCD1 ZFP92 LCA10 SSR4 ATP2B3 FAM58A FAM50A HCFC1 MAGEA1 SLC10A3 BGN AVPR2 PNCK PNMA6A FAM3A LAGE3 TAZ LOC105373386 FAM223A OPN1LW LOC105373383 TMEM187 NAA10 TEX28 SRPK3 MECP2 HAUS7 SNORA70 BCAP31 ZNF275 UBL4A DUSP9 L1CAM LOC105373377 G6PD GDI1 PLXNB3 PLXNA3 MIR6858 EMD IRAK1 ATP6AP1 ARHGAP4 OPN1MW RENBP OPN1MW3 LOC107983954 RPL10 FLNA TKTL1 SLC6A8 IKBKG PDZD4 MIR718 OPN1MW2 CH17-340M24.3 DNASE1L1 LOC107987332 IDH3G TREX2 LOC105373378 MIR3202-2 MIR3202-1 CTAG1A HCFC1-AS1 LOC105373381 |
nsv508816 | Chr.X:154492171 - 154591783 on Build GRCh38 | Insertion | FAM223A G6PD FAM3A CTAG1A IKBKG |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |