Assay Details
Target Gene Details
Entrez Gene ID: | 64377 |
Gene Name: | carbohydrate sulfotransferase 8 |
Gene Aliases: |
GALNAC4ST1, GalNAc4ST, PSS3 |
Location: |
Chr.19:33621955-33773509 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHST8 | NM_001127895.1 | 1 | 89 | NP_001121367.1 |
NM_001127896.1 | 1 | 77 | NP_001121368.1 | |
BC011380.1 | AAH11380.1 | |||
BC014250.2 | 1 | 73 | AAH14250.1 | |
BI917117.1 | 1 | 77 | ||
BX354555.2 | 1 | 89 | ||
DB500322.1 | 1 | 89 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv139e55 | Chr.19:33406261 - 34032878 on Build GRCh38 | Gain | PEPD LOC100996681 KCTD15 CHST8 |
esv23382 | Chr.19:33621577 - 33622414 on Build GRCh38 | Loss | CHST8 |
dgv6406n54 | Chr.19:33621658 - 33622360 on Build GRCh38 | Gain | CHST8 |
nsv579329 | Chr.19:33621607 - 33622206 on Build GRCh38 | Loss | CHST8 |
esv2758755 | Chr.19:33286168 - 34090656 on Build GRCh38 | Gain | CEBPA-AS1 CEBPG PEPD LOC100996681 KCTD15 CEBPA CHST8 |
nsv579326 | Chr.19:33614472 - 33622360 on Build GRCh38 | Gain | CHST8 |
dgv6404n54 | Chr.19:33620377 - 33622360 on Build GRCh38 | Gain | CHST8 |
More Information
Additional Information:
For this assay, SNP(s) [rs111308825] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |