Assay Details
Target Gene Details
Entrez Gene ID: | 140733 |
Gene Name: | MACRO domain containing 2 |
Gene Aliases: |
C20orf133 |
Location: |
Chr.20:13995476-16053197 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MACROD2 | NM_080676.5 | NP_542407.2 | ||
XM_017027677.1 | XP_016883166.1 | |||
AK131348.1 | BAD18504.1 |
Target Gene Details
Entrez Gene ID: | 140848 |
Gene Name: | MACROD2 intronic transcript 1 |
Gene Aliases: |
C20orf68, NCRNA00227, bA467D7.4 |
Location: |
Chr.20:14554384-14628908 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MACROD2-IT1 | NR_104193.2 | |||
CR747489.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3893293 | Chr.20:14573099 - 14640308 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
dgv7464n54 | Chr.20:14549011 - 14607522 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
nsv517905 | Chr.20:14556162 - 14646199 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
nsv585450 | Chr.20:14568030 - 14629643 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
dgv4250n100 | Chr.20:14543758 - 14705651 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
nsv1055269 | Chr.20:14580246 - 14665555 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
esv2763220 | Chr.20:14580258 - 14615047 on Build GRCh38 | Gain | MACROD2 MACROD2-IT1 |
nsv1061504 | Chr.20:14537718 - 14585075 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
nsv1064721 | Chr.20:14404285 - 14667577 on Build GRCh38 | Loss | MACROD2 MACROD2-IT1 |
nsv833926 | Chr.20:14429507 - 14591690 on Build GRCh38 | Gain | MACROD2 MACROD2-IT1 |
More Information
Additional Information:
For this assay, SNP(s) [rs73612369] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |