Assay Details
Target Gene Details
Entrez Gene ID: | 30813 |
Gene Name: | visual system homeobox 1 |
Gene Aliases: |
CAASDS, KTCN, KTCN1, PPCD, PPCD1, PPD, RINX |
Location: |
Chr.20:25069940-25082379 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
VSX1 | XM_017027837.1 | 5 | 3042 | XP_016883326.1 |
XM_017027838.1 | 4 | 2861 | XP_016883327.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1056345 | Chr.20:24838934 - 25187523 on Build GRCh38 | Gain | ACSS1 VSX1 CST7 APMAP LOC284798 LOC101926889 |
esv3645552 | Chr.20:24494271 - 25093181 on Build GRCh38 | Gain | ACSS1 VSX1 CST7 SYNDIG1 APMAP |
nsv522873 | Chr.20:23923336 - 26134874 on Build GRCh38 | Gain | LOC105372582 VSX1 CST7 APMAP PYGB FAM182A LOC105372585 LOC101926889 FAM182B VN1R108P GGTLC1 NINL ABHD12 ENTPD6 ZNF337-AS1 ACSS1 FLJ33581 SYNDIG1 LOC105372580 LOC284798 ZNF337 NANP LOC101926955 LOC101926935 LOC100134868 NCOR1P1 GINS1 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |