Assay Details
Target Gene Details
Entrez Gene ID: | 30813 |
Gene Name: | visual system homeobox 1 |
Gene Aliases: |
CAASDS, KTCN, KTCN1, PPCD, PPCD1, PPD, RINX |
Location: |
Chr.20:25069940-25082379 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
VSX1 | NM_001256271.1 | 4 | 1749 | NP_001243200.1 |
NM_001256272.1 | 5 | 1930 | NP_001243201.1 | |
NR_045948.1 | 6 | 2038 | ||
NR_045951.1 | 5 | 1857 | ||
XM_017027837.1 | 5 | 2272 | XP_016883326.1 | |
XM_017027838.1 | 4 | 2091 | XP_016883327.1 | |
BM680858.1 | 1 | 307 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1056345 | Chr.20:24838934 - 25187523 on Build GRCh38 | Gain |
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esv3645552 | Chr.20:24494271 - 25093181 on Build GRCh38 | Gain |
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nsv522873 | Chr.20:23923336 - 26134874 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)