Assay Details
Target Gene Details
Entrez Gene ID: | 56261 |
Gene Name: | glycerophosphocholine phosphodiesterase 1 |
Gene Aliases: |
EDI3, GDE5, GDPD6, PREI4 |
Location: |
Chr.20:5544434-5611026 on Build GRCh38 |
Assay Gene Location: | Within Intron 21 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GPCPD1 | NM_019593.3 | NP_062539.1 | ||
XM_005260758.4 | XP_005260815.1 | |||
XM_005260761.1 | XP_005260818.1 | |||
XM_006723596.3 | XP_006723659.1 | |||
AB037855.1 | ||||
AK001947.1 | BAA91994.1 | |||
AL833069.1 | ||||
BC027588.2 | AAH27588.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv4242n100 | Chr.20:5464900 - 5825417 on Build GRCh38 | Gain | GPCPD1 LOC101929207 LOC643406 C20orf196 LINC00654 |
esv2762059 | Chr.20:5326723 - 5742731 on Build GRCh38 | Gain | GPCPD1 LOC101929207 LOC643406 LINC00654 LINC00658 |
nsv585328 | Chr.20:5546530 - 5574162 on Build GRCh38 | Loss | GPCPD1 |
dgv4241n100 | Chr.20:5432523 - 5731197 on Build GRCh38 | Gain | GPCPD1 LOC101929207 LOC643406 LINC00654 LINC00658 |
nsv1066860 | Chr.20:4973849 - 5652866 on Build GRCh38 | Gain | PCNA PCNA-AS1 PROKR2 GPCPD1 LOC101929207 CDS2 LOC643406 LINC00654 LINC00658 LOC728283 TMEM230 SLC23A2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |