Assay Details
Target Gene Details
Entrez Gene ID: | 84181 |
Gene Name: | chromodomain helicase DNA binding protein 6 |
Gene Aliases: |
CHD-6, CHD5, RIGB |
Location: |
Chr.20:41402101-41618494 on Build GRCh38 |
Assay Gene Location: | Within Intron 41 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHD6 | NM_032221.4 | NP_115597.3 | ||
XM_005260573.2 | XP_005260630.1 | |||
XM_005260576.4 | XP_005260633.1 | |||
XM_011529080.2 | XP_011527382.1 | |||
XM_011529082.2 | XP_011527384.1 | |||
XM_017028099.1 | XP_016883588.1 | |||
XM_017028100.1 | XP_016883589.1 | |||
XM_017028101.1 | XP_016883590.1 | |||
XM_017028102.1 | XP_016883591.1 | |||
XM_017028103.1 | XP_016883592.1 | |||
AB037756.2 | BAA92573.2 | |||
AK098144.1 | ||||
AY034072.1 | AAK56405.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1064246 | Chr.20:40261343 - 42254320 on Build GRCh38 | Loss | ZHX3 MAFB MIR6871 CHD6 PTPRT EMILIN3 PLCG1 LPIN3 TOP1 PLCG1-AS1 LOC100128988 |
nsv3381 | Chr.20:41296686 - 42137056 on Build GRCh38 | Deletion | ZHX3 CHD6 PTPRT EMILIN3 LPIN3 |
nsv833984 | Chr.20:41239403 - 41417792 on Build GRCh38 | Loss | ZHX3 CHD6 EMILIN3 LPIN3 |
More Information
Additional Information:
For this assay, SNP(s) [rs79928874] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |