Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | CACFD1 FCN2 GBGT1 MIR3689A SLC2A6 STKLD1 C9orf116 SPACA9 MIR4669 MIR3689C DBH REXO4 SNORD36A BRD3 MIR3689E ADAMTS13 RPL7A SARDH SURF6 DBH-AS1 OLFM1 SNORD24 MIR6877 LOC401557 MRPS2 RXRA RALGDS COL5A1-AS1 PPP1R26-AS1 WDR5 LOC101448202 GFI1B SNORD36C CEL MIR3689F SURF4 GTF3C5 MIR3689B MIR3689D2 LINC00094 TMEM8C MIR3689D1 LOC101928193 PPP1R26 AK8 RNU6ATAC ABO TSC1 MED22 CELP MIR548AW OBP2B ADAMTSL2 LOC101928525 LCN1 SURF1 COL5A1 LOC100130548 SURF2 FAM163B VAV2 LOC100996574 SNORD141A LOC105376306 C9orf62 SNORD36B FCN1 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | CEL MIR6877 GTF3C5 LOC100996574 LOC105376306 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GFI1B CEL GBGT1 CELP MIR6877 GTF3C5 LOC100996574 RALGDS SNORD141A LOC105376306 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | CEL MIR6877 GTF3C5 LOC100996574 SNORD141A LOC105376306 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |