Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | SNORD24 REXO4 VAV2 OLFM1 PPP1R26-AS1 RXRA SARDH RNU6ATAC LOC105376306 MIR3689B C9orf116 COL5A1 CEL MIR4669 FAM163B CELP ABO SURF4 MIR6877 OBP2B FCN2 LOC101928525 STKLD1 RALGDS LOC101928193 SNORD36C MIR3689A MIR548AW MIR3689F SURF2 GBGT1 LINC00094 CACFD1 GFI1B MIR3689C LOC100130548 PPP1R26 LOC401557 C9orf62 DBH-AS1 WDR5 SURF1 LOC101448202 ADAMTS13 MRPS2 ADAMTSL2 DBH SURF6 MIR3689D2 BRD3 LOC100996574 MIR3689D1 AK8 LCN1 FCN1 MIR3689E SLC2A6 TSC1 MED22 GTF3C5 SPACA9 SNORD36B SNORD141A SNORD36A COL5A1-AS1 TMEM8C RPL7A |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 LOC105376306 MIR6877 LOC100996574 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | RALGDS GTF3C5 GFI1B SNORD141A LOC105376306 MIR6877 LOC100996574 CEL GBGT1 CELP |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 SNORD141A LOC105376306 MIR6877 LOC100996574 CEL |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |